EnhancerDB
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  3. vista3590[chr1:160444087-160444465]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3590[chr1:160444087-160444465]
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Tissue distribution of vista3590
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Transcription factor that possibly regulate vista3590[chr1:160444087-160444465]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 160444207 160444467 RUNX3 UCSC Txn Factor no Conserved 107839557
chr1 160444229 160444360 SPI1 UCSC Txn Factor no Conserved 107839560
chr1 160444081 160444102 IRF1 JASPAR yes 32518572
chr1 160444081 160444102 IRF1 JASPAR yes 118383951
chr1 160444085 160444100 PRDM1 JASPAR yes 32518573
chr1 160444085 160444100 PRDM1 JASPAR yes 118383952
chr1 160444085 160444103 IRF2 JASPAR yes 32518574
chr1 160444085 160444103 IRF2 JASPAR yes 118383953
chr1 160444086 160444098 IRF1 JASPAR yes 32518575
chr1 160444086 160444098 IRF1 JASPAR yes 118383954
chr1 160444109 160444119 GSC2 JASPAR yes 32518576
chr1 160444109 160444119 GSC2 JASPAR yes 118383955
chr1 160444110 160444118 OTX1 JASPAR yes 32518577
chr1 160444110 160444118 OTX2 JASPAR yes 32518578
chr1 160444110 160444118 OTX1 JASPAR yes 118383956
chr1 160444110 160444118 OTX2 JASPAR yes 118383957
chr1 160444115 160444121 TBP TRANSFAC yes 32518579
chr1 160444115 160444121 TBP TRANSFAC yes 118383958
chr1 160444144 160444162 RARA JASPAR yes 32518580
chr1 160444144 160444162 RARA JASPAR yes 118383959
chr1 160444150 160444163 NR2F1 JASPAR yes 32518581
chr1 160444150 160444163 NR2F1 JASPAR yes 118383960
chr1 160444151 160444166 HNF4G JASPAR yes 32518582
chr1 160444151 160444166 NR2C2 JASPAR yes 32518583
chr1 160444151 160444166 HNF4G JASPAR yes 118383961
chr1 160444151 160444166 NR2C2 JASPAR yes 118383962
chr1 160444152 160444166 RXRB JASPAR yes 32518584
chr1 160444152 160444166 RXRG JASPAR yes 32518585
chr1 160444152 160444166 RXRB JASPAR yes 118383963
chr1 160444152 160444166 RXRG JASPAR yes 118383964
chr1 160444152 160444167 HNF4A JASPAR yes 32518586
chr1 160444152 160444167 HNF4A JASPAR yes 118383965
chr1 160444154 160444158 ESR1 TRANSFAC yes 32518587
chr1 160444154 160444158 ESR1 TRANSFAC yes 118383966
chr1 160444179 160444189 NFATC3 JASPAR yes 32518588
chr1 160444179 160444189 NFATC3 JASPAR yes 118383967
chr1 160444193 160444204 STAT3 JASPAR yes 32518589
chr1 160444193 160444204 STAT3 JASPAR yes 118383968
chr1 160444196 160444206 NFATC3 JASPAR yes 32518590
chr1 160444196 160444206 NFATC3 JASPAR yes 118383969
chr1 160444202 160444219 ZNF410 JASPAR yes 32518591
chr1 160444202 160444219 ZNF410 JASPAR yes 118383970
chr1 160444222 160444232 TEAD1 JASPAR yes 32518592
chr1 160444222 160444232 TEAD1 JASPAR yes 118383971
chr1 160444232 160444247 HSF1 JASPAR yes 32518593
chr1 160444232 160444247 HSF1 JASPAR yes 118383972
chr1 160444232 160444250 NFYA JASPAR yes 32518594
chr1 160444232 160444250 NFYA JASPAR yes 118383973
chr1 160444254 160444265 STAT1 JASPAR yes 32518595
chr1 160444254 160444265 STAT1 JASPAR yes 118383974
chr1 160444258 160444263 ETS2 TRANSFAC yes 32518596
chr1 160444258 160444263 ETS2 TRANSFAC yes 118383975
chr1 160444263 160444273 ERF JASPAR yes 32518597
chr1 160444263 160444273 ERF JASPAR yes 118383976
chr1 160444265 160444272 SPI1 JASPAR yes 32518598
chr1 160444265 160444272 SPI1 JASPAR yes 118383977
chr1 160444274 160444289 TFAP2A JASPAR yes 32518599
chr1 160444274 160444289 TFAP2C JASPAR yes 32518600
chr1 160444274 160444289 TFAP2A JASPAR yes 118383978
chr1 160444274 160444289 TFAP2C JASPAR yes 118383979
chr1 160444282 160444287 GATA2 JASPAR yes 32518601
chr1 160444282 160444287 GATA2 JASPAR yes 118383980
chr1 160444285 160444288 MYB TRANSFAC yes 32518602
chr1 160444285 160444288 MYB TRANSFAC yes 118383981
chr1 160444295 160444308 SCRT2 JASPAR yes 32518603
chr1 160444295 160444308 SCRT2 JASPAR yes 118383982
chr1 160444297 160444310 ELF1 JASPAR yes 32518604
chr1 160444297 160444310 ELF1 JASPAR yes 118383983
chr1 160444299 160444310 ELF5 JASPAR yes 32518605
chr1 160444299 160444310 ELF5 JASPAR yes 118383984
chr1 160444300 160444310 GABPA JASPAR yes 32518606
chr1 160444300 160444310 GABPA JASPAR yes 118383985
chr1 160444329 160444332 MYB TRANSFAC yes 32518607
chr1 160444329 160444332 MYB TRANSFAC yes 118383986
chr1 160444340 160444351 ESRRB JASPAR yes 32518608
chr1 160444340 160444351 ESRRB JASPAR yes 118383987
chr1 160444365 160444369 ESR1 TRANSFAC yes 32518609
chr1 160444365 160444369 ESR1 TRANSFAC yes 118383988
chr1 160444366 160444380 PAX6 JASPAR yes 32518610
chr1 160444366 160444380 PAX6 JASPAR yes 118383989
chr1 160444372 160444383 ESRRB JASPAR yes 32518611
chr1 160444372 160444383 ESRRB JASPAR yes 118383990
chr1 160444374 160444384 RORA JASPAR yes 32518612
chr1 160444374 160444384 RORA JASPAR yes 118383991
chr1 160444380 160444390 HMBOX1 JASPAR yes 32518613
chr1 160444380 160444390 HMBOX1 JASPAR yes 118383992
chr1 160444383 160444401 SRF JASPAR yes 32518614
chr1 160444383 160444401 SRF JASPAR yes 118383993
chr1 160444385 160444400 MEF2C JASPAR yes 32518615
chr1 160444385 160444400 MEF2C JASPAR yes 118383994
chr1 160444386 160444398 SRF JASPAR yes 32518616
chr1 160444386 160444398 SRF JASPAR yes 118383995
chr1 160444417 160444432 MAFK JASPAR yes 32518617
chr1 160444417 160444432 MAFK JASPAR yes 118383996
chr1 160444422 160444440 IRF2 JASPAR yes 32518618
chr1 160444422 160444440 IRF2 JASPAR yes 118383997
chr1 160444423 160444444 IRF1 JASPAR yes 32518619
chr1 160444423 160444444 IRF1 JASPAR yes 118383998
chr1 160444425 160444440 STAT2 JASPAR yes 32518620
chr1 160444425 160444440 STAT2 JASPAR yes 118383999
chr1 160444426 160444436 ETV6 JASPAR yes 32518621
chr1 160444426 160444436 ETV6 JASPAR yes 118384000
chr1 160444426 160444440 SPI1 JASPAR yes 32518622
chr1 160444426 160444440 SPI1 JASPAR yes 118384001
chr1 160444427 160444441 IRF7 JASPAR yes 32518623
chr1 160444427 160444441 IRF8 JASPAR yes 32518624
chr1 160444427 160444441 IRF7 JASPAR yes 118384002
chr1 160444427 160444441 IRF8 JASPAR yes 118384003
chr1 160444448 160444463 FOXP1 JASPAR yes 32518625
chr1 160444448 160444463 FOXP1 JASPAR yes 118384004
chr1 160444449 160444464 FOXP1 JASPAR yes 32518626
chr1 160444449 160444464 FOXP1 JASPAR yes 118384005
chr1 160444450 160444465 FOXP1 JASPAR yes 32518627
chr1 160444450 160444465 FOXP1 JASPAR yes 118384006
SNP sites on vista3590[chr1:160444087-160444465]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 160444229 rs73012463 T C
RUNX3 SPI1 TEAD1
665381
chr1 160444355 rs150754524 G T
RUNX3 SPI1
665382
chr1 160444429 rs143382600 C T
ETV6 IRF1 IRF2 IRF7 IRF8 MAFK RUNX3 SPI1 STAT2
665383
chr1 160444450 rs150382860 T A
FOXP1 RUNX3
665384
Genes possibly regulated by vista3590[chr1:160444087-160444465]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 160370376 160398468 + VANGL2 ENSG00000162738.5 160370376 0.76 0.99 1454 26289
chr1 160454820 160493052 - SLAMF6 ENSG00000162739.9 160493052 0.93 0.95 1455 51413
Expression level of Genes
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miRNAs possibly regulated by vista3590[chr1:160444087-160444465]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results