EnhancerDB
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  3. vista36[chr1:1294735-1294982]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista36[chr1:1294735-1294982]
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Tissue distribution of vista36
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Transcription factor that possibly regulate vista36[chr1:1294735-1294982]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 1294748 1294754 SOX10 JASPAR yes 26190338
chr1 1294748 1294754 SOX10 JASPAR yes 118214826
chr1 1294753 1294767 FOXF2 JASPAR yes 26190339
chr1 1294753 1294767 FOXF2 JASPAR yes 118214827
chr1 1294755 1294767 FOXC2 JASPAR yes 26190340
chr1 1294755 1294767 FOXC2 JASPAR yes 118214828
chr1 1294756 1294768 FOXI1 JASPAR yes 26190341
chr1 1294756 1294768 FOXI1 JASPAR yes 118214829
chr1 1294758 1294766 FOXG1 JASPAR yes 26190342
chr1 1294758 1294766 FOXO3 JASPAR yes 26190343
chr1 1294758 1294766 FOXG1 JASPAR yes 118214830
chr1 1294758 1294766 FOXO3 JASPAR yes 118214831
chr1 1294774 1294777 MYB TRANSFAC yes 26190344
chr1 1294774 1294777 MYB TRANSFAC yes 118214832
chr1 1294810 1294822 PBX1 JASPAR yes 26190345
chr1 1294810 1294822 PBX1 JASPAR yes 118214833
chr1 1294818 1294833 RUNX2 JASPAR yes 26190346
chr1 1294818 1294833 RUNX2 JASPAR yes 118214834
chr1 1294823 1294838 FOXP1 JASPAR yes 26190347
chr1 1294823 1294838 FOXP1 JASPAR yes 118214835
chr1 1294825 1294840 FOXP1 JASPAR yes 26190348
chr1 1294825 1294840 FOXP1 JASPAR yes 118214836
chr1 1294830 1294839 SRY JASPAR yes 26190349
chr1 1294830 1294839 SRY JASPAR yes 118214837
chr1 1294830 1294848 NR3C1 JASPAR yes 26190350
chr1 1294830 1294848 NR3C1 JASPAR yes 118214838
chr1 1294843 1294858 RUNX2 JASPAR yes 26190351
chr1 1294843 1294858 RUNX2 JASPAR yes 118214839
chr1 1294844 1294853 RUNX2 JASPAR yes 26190352
chr1 1294844 1294853 RUNX2 JASPAR yes 118214840
chr1 1294844 1294854 RUNX3 JASPAR yes 26190353
chr1 1294844 1294854 RUNX3 JASPAR yes 118214841
chr1 1294861 1294877 ZNF143 JASPAR yes 26190354
chr1 1294861 1294877 ZNF143 JASPAR yes 118214842
chr1 1294879 1294884 SP1 TRANSFAC yes 26190355
chr1 1294879 1294884 SP1 TRANSFAC yes 118214843
chr1 1294881 1294888 SP1 TRANSFAC yes 26190356
chr1 1294881 1294888 SP1 TRANSFAC yes 118214844
chr1 1294883 1294888 SP1 TRANSFAC yes 26190357
chr1 1294883 1294888 SP1 TRANSFAC yes 118214845
chr1 1294886 1294896 NKX2-3 JASPAR yes 26190358
chr1 1294886 1294896 NKX2-3 JASPAR yes 118214846
chr1 1294910 1294925 TFAP2A JASPAR yes 26190359
chr1 1294910 1294925 TFAP2C JASPAR yes 26190360
chr1 1294910 1294925 TFAP2A JASPAR yes 118214847
chr1 1294910 1294925 TFAP2C JASPAR yes 118214848
chr1 1294912 1294925 TFAP2A JASPAR yes 26190361
chr1 1294912 1294925 TFAP2B JASPAR yes 26190362
chr1 1294912 1294925 TFAP2C JASPAR yes 26190363
chr1 1294912 1294925 TFAP2A JASPAR yes 118214849
chr1 1294912 1294925 TFAP2B JASPAR yes 118214850
chr1 1294912 1294925 TFAP2C JASPAR yes 118214851
chr1 1294913 1294927 PLAG1 JASPAR yes 26190364
chr1 1294913 1294927 PLAG1 JASPAR yes 118214852
chr1 1294923 1294935 NHLH1 JASPAR yes 26190365
chr1 1294923 1294935 NHLH1 JASPAR yes 118214853
chr1 1294926 1294945 REST JASPAR yes 26190366
chr1 1294926 1294945 REST JASPAR yes 118214854
chr1 1294932 1294937 SP1 TRANSFAC yes 26190367
chr1 1294932 1294937 SP1 TRANSFAC yes 118214855
chr1 1294936 1294949 NFKB2 JASPAR yes 26190368
chr1 1294936 1294949 NFKB2 JASPAR yes 118214856
chr1 1294942 1294956 RXRB JASPAR yes 26190369
chr1 1294942 1294956 RXRG JASPAR yes 26190370
chr1 1294942 1294956 RXRB JASPAR yes 118214857
chr1 1294942 1294956 RXRG JASPAR yes 118214858
chr1 1294942 1294957 NR2C2 JASPAR yes 26190371
chr1 1294942 1294957 NR2C2 JASPAR yes 118214859
chr1 1294948 1294963 HNF4A JASPAR yes 26190372
chr1 1294948 1294963 HNF4A JASPAR yes 118214860
chr1 1294949 1294963 NR2F1 JASPAR yes 26190373
chr1 1294949 1294963 NR2F1 JASPAR yes 118214861
chr1 1294949 1294964 HNF4G JASPAR yes 26190374
chr1 1294949 1294964 NR2C2 JASPAR yes 26190375
chr1 1294949 1294964 HNF4G JASPAR yes 118214862
chr1 1294949 1294964 NR2C2 JASPAR yes 118214863
chr1 1294952 1294971 PAX5 JASPAR yes 26190376
chr1 1294952 1294971 PAX5 JASPAR yes 118214864
chr1 1294967 1294986 REST JASPAR yes 26190377
chr1 1294967 1294986 REST JASPAR yes 118214865
SNP sites on vista36[chr1:1294735-1294982]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 1294886 rs183281743 G A
NKX2-3 SP1
6004
chr1 1294928 rs2649608 A G
NHLH1 REST
6005
chr1 1294973 rs558138750 T C
REST
6006
Genes possibly regulated by vista36[chr1:1294735-1294982]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 1189289 1209265 - UBE2J2 ENSG00000160087.16 1209265 0.6 0.99 22 14530
chr1 1215816 1227409 + SCNN1D ENSG00000162572.15 1215816 0.8 1.0 23 21081
chr1 1227756 1244989 - ACAP3 ENSG00000131584.14 1244989 0.7 1.0 24 50254
chr1 1243947 1247057 + PUSL1 ENSG00000169972.7 1243947 0.52 1.0 25 49212
chr1 1246965 1260071 - CPSF3L ENSG00000127054.14 1260071 0.62 1.0 26 65336
chr1 1260136 1264277 + GLTPD1 ENSG00000224051.2 1260136 0.68 0.99 27 65401
chr1 1266694 1270686 + TAS1R3 ENSG00000169962.4 1266694 0.93 0.99 28 71959
chr1 1270656 1284730 - DVL1 ENSG00000107404.13 1284730 0.62 1.0 29 89995
chr1 1288069 1297157 - MXRA8 ENSG00000162576.12 1297157 0.75 1.0 30 97825
chr1 1309110 1310875 - AURKAIP1 ENSG00000175756.9 1310875 0.75 0.99 31 84107
chr1 1321091 1334708 - CCNL2 ENSG00000221978.7 1334708 0.62 1.0 32 60274
chr1 1334902 1337426 + RP4-758J18.2 ENSG00000224870.3 1334902 0.53 1.0 33 60080
chr1 1337288 1342693 - MRPL20 ENSG00000242485.1 1342693 0.77 0.99 34 52289
chr1 1353800 1357149 - ANKRD65 ENSG00000235098.4 1357149 0.81 1.0 35 37833
chr1 1361508 1363167 + TMEM88B ENSG00000205116.3 1361508 0.9 0.99 36 33474
chr1 1370241 1378262 + VWA1 ENSG00000179403.10 1370241 0.76 1.0 37 24741
chr1 1385069 1405538 + ATAD3C ENSG00000215915.5 1385069 0.83 1.0 38 9913
Expression level of Genes
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miRNAs possibly regulated by vista36[chr1:1294735-1294982]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results