EnhancerDB
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  3. vista3600[chr1:160550267-160550490]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3600[chr1:160550267-160550490]
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Tissue distribution of vista3600
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Transcription factor that possibly regulate vista3600[chr1:160550267-160550490]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 160550275 160550292 RXRA JASPAR yes 118384446
chr1 160550289 160550292 MYB TRANSFAC yes 118384447
chr1 160550298 160550302 YY1 TRANSFAC yes 118384448
chr1 160550321 160550331 HMBOX1 JASPAR yes 118384449
chr1 160550327 160550330 MYB TRANSFAC yes 118384450
chr1 160550340 160550360 RREB1 JASPAR yes 118384451
chr1 160550343 160550354 CEBPA JASPAR yes 118384452
chr1 160550343 160550355 DBP JASPAR yes 118384453
chr1 160550343 160550355 HLF JASPAR yes 118384454
chr1 160550343 160550355 TEF JASPAR yes 118384455
chr1 160550344 160550354 CEBPB JASPAR yes 118384456
chr1 160550344 160550354 CEBPD JASPAR yes 118384457
chr1 160550344 160550354 CEBPE JASPAR yes 118384458
chr1 160550344 160550354 CEBPG JASPAR yes 118384459
chr1 160550344 160550355 CEBPB JASPAR yes 118384460
chr1 160550346 160550357 FOXH1 JASPAR yes 118384461
chr1 160550381 160550386 TFAP2A TRANSFAC yes 118384462
chr1 160550381 160550387 MZF1 JASPAR yes 118384463
chr1 160550384 160550389 GATA2 JASPAR yes 118384464
chr1 160550388 160550394 HiNF-A TRANSFAC yes 118384465
chr1 160550390 160550403 POU2F2 JASPAR yes 118384466
chr1 160550392 160550406 POU4F1 JASPAR yes 118384467
chr1 160550392 160550408 POU4F2 JASPAR yes 118384468
chr1 160550392 160550408 POU4F3 JASPAR yes 118384469
chr1 160550397 160550401 YY1 TRANSFAC yes 118384470
chr1 160550403 160550414 BATF JASPAR yes 118384471
chr1 160550405 160550416 FOSL1 JASPAR yes 118384472
chr1 160550405 160550423 MAFF JASPAR yes 118384473
chr1 160550406 160550421 MAFK JASPAR yes 118384474
chr1 160550409 160550421 NHLH1 JASPAR yes 118384475
chr1 160550410 160550420 MSC JASPAR yes 118384476
chr1 160550410 160550420 NHLH1 JASPAR yes 118384477
chr1 160550410 160550420 TFAP4 JASPAR yes 118384478
chr1 160550421 160550426 TFAP2A TRANSFAC yes 118384479
chr1 160550421 160550427 MZF1 JASPAR yes 118384480
chr1 160550440 160550445 TFAP2A TRANSFAC yes 118384481
chr1 160550440 160550446 MZF1 JASPAR yes 118384482
chr1 160550478 160550481 MYB TRANSFAC yes 118384483
SNP sites on vista3600[chr1:160550267-160550490]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 160550280 rs1875766 G A
RXRA
666224
chr1 160550324 rs117465390 T C
HMBOX1
666225
chr1 160550347 rs141846822 T C
CEBPA CEBPB CEBPD CEBPE CEBPG DBP FOXH1 HLF RREB1 TEF
666226
chr1 160550385 rs143204202 G A
GATA2 MZF1 TFAP2A
666227
chr1 160550465 rs370214478 G A no 666228
chr1 160550489 rs116666429 G A no 666229
Genes possibly regulated by vista3600[chr1:160550267-160550490]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 160454820 160493052 - SLAMF6 ENSG00000162739.9 160493052 0.93 0.95 1455 42785
chr1 160510885 160549306 - CD84 ENSG00000066294.10 160549306 0.94 0.92 1456 99039
chr1 160577890 160617085 - SLAMF1 ENSG00000117090.10 160617085 0.94 0.96 1457 33405
Expression level of Genes
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miRNAs possibly regulated by vista3600[chr1:160550267-160550490]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results