EnhancerDB
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  3. vista3603[chr1:160599558-160599933]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3603[chr1:160599558-160599933]
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Tissue distribution of vista3603
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Transcription factor that possibly regulate vista3603[chr1:160599558-160599933]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 160594365 160609913 POLR2A UCSC Txn Factor no Conserved 107839959
chr1 160599565 160599581 SRF JASPAR yes 32527684
chr1 160599565 160599581 SRF JASPAR yes 118384530
chr1 160599601 160599620 REST JASPAR yes 32527685
chr1 160599601 160599620 REST JASPAR yes 118384531
chr1 160599604 160599618 NR2F1 JASPAR yes 32527686
chr1 160599604 160599618 NR2F1 JASPAR yes 118384532
chr1 160599607 160599613 TCF4 TRANSFAC yes 32527687
chr1 160599607 160599613 TCF4 TRANSFAC yes 118384533
chr1 160599625 160599630 ETS2 TRANSFAC yes 32527688
chr1 160599625 160599630 ETS2 TRANSFAC yes 118384534
chr1 160599635 160599644 SOX9 JASPAR yes 32527689
chr1 160599635 160599644 SOX9 JASPAR yes 118384535
chr1 160599637 160599646 SRY JASPAR yes 32527690
chr1 160599637 160599646 SRY JASPAR yes 118384536
chr1 160599654 160599668 SPIC JASPAR yes 32527691
chr1 160599654 160599668 SPIC JASPAR yes 118384537
chr1 160599660 160599665 ETS2 TRANSFAC yes 32527692
chr1 160599660 160599665 ETS2 TRANSFAC yes 118384538
chr1 160599661 160599680 REST JASPAR yes 32527693
chr1 160599661 160599680 REST JASPAR yes 118384539
chr1 160599681 160599685 NFE TRANSFAC yes 32527694
chr1 160599681 160599685 NFE TRANSFAC yes 118384540
chr1 160599696 160599711 LEF1 JASPAR yes 32527695
chr1 160599696 160599711 LEF1 JASPAR yes 118384541
chr1 160599713 160599722 SRY JASPAR yes 32527696
chr1 160599713 160599722 SRY JASPAR yes 118384542
chr1 160599715 160599724 SOX9 JASPAR yes 32527697
chr1 160599715 160599724 SOX9 JASPAR yes 118384543
chr1 160599720 160599733 NFKB1 JASPAR yes 32527698
chr1 160599720 160599733 NFKB1 JASPAR yes 118384544
chr1 160599721 160599732 NFKB1 JASPAR yes 32527699
chr1 160599721 160599732 NFKB1 JASPAR yes 118384545
chr1 160599722 160599732 NFKB1 JASPAR yes 32527700
chr1 160599722 160599732 RELA JASPAR yes 32527701
chr1 160599722 160599732 NFKB1 JASPAR yes 118384546
chr1 160599722 160599732 RELA JASPAR yes 118384547
chr1 160599732 160599736 YY1 TRANSFAC yes 32527702
chr1 160599732 160599736 YY1 TRANSFAC yes 118384548
chr1 160599739 160599745 HiNF-A TRANSFAC yes 32527703
chr1 160599739 160599745 HiNF-A TRANSFAC yes 118384549
chr1 160599739 160599754 SOX21 JASPAR yes 32527704
chr1 160599739 160599754 SOX21 JASPAR yes 118384550
chr1 160599739 160599755 SOX4 JASPAR yes 32527705
chr1 160599739 160599755 SOX4 JASPAR yes 118384551
chr1 160599742 160599753 ESRRA JASPAR yes 32527706
chr1 160599742 160599753 ESRRB JASPAR yes 32527707
chr1 160599742 160599753 ESRRA JASPAR yes 118384552
chr1 160599742 160599753 ESRRB JASPAR yes 118384553
chr1 160599744 160599754 RORA JASPAR yes 32527708
chr1 160599744 160599754 RORA JASPAR yes 118384554
chr1 160599754 160599768 SPI1 JASPAR yes 32527709
chr1 160599754 160599768 SPIC JASPAR yes 32527710
chr1 160599754 160599768 SPI1 JASPAR yes 118384555
chr1 160599754 160599768 SPIC JASPAR yes 118384556
chr1 160599760 160599765 ETS2 TRANSFAC yes 32527711
chr1 160599760 160599765 ETS2 TRANSFAC yes 118384557
chr1 160599760 160599771 NFKB1 JASPAR yes 32527712
chr1 160599760 160599771 NFKB1 JASPAR yes 118384558
chr1 160599761 160599776 HSF1 JASPAR yes 32527713
chr1 160599761 160599776 HSF1 JASPAR yes 118384559
chr1 160599780 160599792 PKNOX1 JASPAR yes 32527714
chr1 160599780 160599792 PKNOX2 JASPAR yes 32527715
chr1 160599780 160599792 TGIF1 JASPAR yes 32527716
chr1 160599780 160599792 TGIF2 JASPAR yes 32527717
chr1 160599780 160599792 PKNOX1 JASPAR yes 118384560
chr1 160599780 160599792 PKNOX2 JASPAR yes 118384561
chr1 160599780 160599792 TGIF1 JASPAR yes 118384562
chr1 160599780 160599792 TGIF2 JASPAR yes 118384563
chr1 160599811 160599814 MYB TRANSFAC yes 32527718
chr1 160599811 160599814 MYB TRANSFAC yes 118384564
chr1 160599816 160599834 MAFF JASPAR yes 32527719
chr1 160599816 160599834 MAFF JASPAR yes 118384565
chr1 160599818 160599833 MAFK JASPAR yes 32527720
chr1 160599818 160599833 MAFK JASPAR yes 118384566
chr1 160599818 160599839 MAFG JASPAR yes 32527721
chr1 160599818 160599839 MAFG JASPAR yes 118384567
chr1 160599842 160599857 MAFK JASPAR yes 32527722
chr1 160599842 160599857 MAFK JASPAR yes 118384568
chr1 160599881 160599894 NFKB2 JASPAR yes 32527723
chr1 160599881 160599894 NFKB2 JASPAR yes 118384569
chr1 160599881 160599899 NR3C1 JASPAR yes 32527724
chr1 160599881 160599899 NR3C1 JASPAR yes 118384570
chr1 160599882 160599892 NFKB1 JASPAR yes 32527725
chr1 160599882 160599892 RELA JASPAR yes 32527726
chr1 160599882 160599892 REL JASPAR yes 32527727
chr1 160599882 160599892 NFKB1 JASPAR yes 118384571
chr1 160599882 160599892 RELA JASPAR yes 118384572
chr1 160599882 160599892 REL JASPAR yes 118384573
chr1 160599882 160599893 NFKB1 JASPAR yes 32527728
chr1 160599882 160599893 NFKB1 JASPAR yes 118384574
chr1 160599883 160599887 LFA1 TRANSFAC yes 32527729
chr1 160599883 160599887 LFA1 TRANSFAC yes 118384575
chr1 160599884 160599894 TEAD1 JASPAR yes 32527730
chr1 160599884 160599894 TEAD4 JASPAR yes 32527731
chr1 160599884 160599894 TEAD1 JASPAR yes 118384576
chr1 160599884 160599894 TEAD4 JASPAR yes 118384577
chr1 160599885 160599893 TEAD3 JASPAR yes 32527732
chr1 160599885 160599893 TEAD3 JASPAR yes 118384578
chr1 160599888 160599893 ETS2 TRANSFAC yes 32527733
chr1 160599888 160599893 ETS2 TRANSFAC yes 118384579
chr1 160599900 160599905 ETS2 TRANSFAC yes 32527734
chr1 160599900 160599905 ETS2 TRANSFAC yes 118384580
chr1 160599923 160599938 MEF2C JASPAR yes 32527735
chr1 160599923 160599938 MEF2C JASPAR yes 118384581
chr1 160599926 160599930 YY1 TRANSFAC yes 32527736
chr1 160599926 160599930 YY1 TRANSFAC yes 118384582
SNP sites on vista3603[chr1:160599558-160599933]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 160599652 rs3753383 C G
POLR2A
666616
chr1 160599836 rs3753384 G T
MAFG POLR2A
666617
Genes possibly regulated by vista3603[chr1:160599558-160599933]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 160510885 160549306 - CD84 ENSG00000066294.10 160549306 0.94 0.92 1456 49748
chr1 160577890 160617085 - SLAMF1 ENSG00000117090.10 160617085 0.94 0.96 1457 82848
chr1 160648536 160681641 - CD48 ENSG00000117091.5 160681641 0.95 0.99 1458 18292
Expression level of Genes
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miRNAs possibly regulated by vista3603[chr1:160599558-160599933]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results