EnhancerDB
  1. Home
  2. Enhancers
  3. vista3611[chr1:160680120-160680523]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3611[chr1:160680120-160680523]
Back to top
Tissue distribution of vista3611
Back to top
Transcription factor that possibly regulate vista3611[chr1:160680120-160680523]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 160677023 160682908 POLR2A UCSC Txn Factor no Conserved 107840213
chr1 160677023 160682908 POLR2A UCSC Txn Factor no Conserved 107840214
chr1 160677023 160682908 POLR2A UCSC Txn Factor no Conserved 107840215
chr1 160677023 160682908 POLR2A UCSC Txn Factor no Conserved 107840216
chr1 160680109 160680121 POU2F1 JASPAR yes 32533512
chr1 160680109 160680121 POU2F1 JASPAR yes 118385173
chr1 160680110 160680123 POU2F2 JASPAR yes 32533513
chr1 160680110 160680123 POU2F2 JASPAR yes 118385174
chr1 160680111 160680120 POU3F4 JASPAR yes 32533514
chr1 160680111 160680120 POU5F1B JASPAR yes 32533515
chr1 160680111 160680120 POU3F4 JASPAR yes 118385175
chr1 160680111 160680120 POU5F1B JASPAR yes 118385176
chr1 160680131 160680144 SMAD2 JASPAR yes 32533516
chr1 160680131 160680144 SMAD2 JASPAR yes 118385177
chr1 160680153 160680166 POU2F2 JASPAR yes 32533517
chr1 160680153 160680166 POU2F2 JASPAR yes 118385178
chr1 160680153 160680167 POU1F1 JASPAR yes 32533518
chr1 160680153 160680167 POU1F1 JASPAR yes 118385179
chr1 160680154 160680167 POU3F3 JASPAR yes 32533519
chr1 160680154 160680167 POU3F3 JASPAR yes 118385180
chr1 160680161 160680165 YY1 TRANSFAC yes 118385181
chr1 160680169 160680172 MYB TRANSFAC yes 118385182
chr1 160680193 160680197 TEAD2 TRANSFAC yes 118385183
chr1 160680195 160680198 MYB TRANSFAC yes 118385184
chr1 160680208 160680221 DUXA JASPAR yes 118385185
chr1 160680209 160680212 MYB TRANSFAC yes 118385186
chr1 160680209 160680220 DUX4 JASPAR yes 118385187
chr1 160680217 160680231 ONECUT3 JASPAR yes 118385188
chr1 160680223 160680227 H1TF2 TRANSFAC yes 118385189
chr1 160680223 160680227 NFE TRANSFAC yes 118385190
chr1 160680223 160680227 SRF TRANSFAC yes 118385191
chr1 160680230 160680235 GATA2 JASPAR yes 118385192
chr1 160680236 160680242 TCF1 TRANSFAC yes 118385193
chr1 160680242 160680247 GATA2 JASPAR yes 118385194
chr1 160680243 160680255 TEF JASPAR yes 118385195
chr1 160680244 160680257 DUXA JASPAR yes 118385196
chr1 160680245 160680248 MYB TRANSFAC yes 118385197
chr1 160680252 160680261 SNAI2 JASPAR yes 118385198
chr1 160680254 160680263 ZEB1 JASPAR yes 118385199
chr1 160680255 160680263 TBX5 JASPAR yes 118385200
chr1 160680259 160680269 SREBF1 JASPAR yes 118385201
chr1 160680259 160680269 SREBF2 JASPAR yes 118385202
chr1 160680267 160680276 SRY JASPAR yes 118385203
chr1 160680272 160680278 TCF1 TRANSFAC yes 118385204
chr1 160680312 160680329 RARA JASPAR yes 118385205
chr1 160680320 160680333 NR2F1 JASPAR yes 118385206
chr1 160680322 160680330 NR4A2 JASPAR yes 118385207
chr1 160680322 160680336 RXRB JASPAR yes 118385208
chr1 160680324 160680328 ESR1 TRANSFAC yes 118385209
chr1 160680330 160680334 NFE TRANSFAC yes 118385210
chr1 160680334 160680341 PEA3 TRANSFAC yes 118385211
chr1 160680339 160680347 FOXO3 JASPAR yes 118385212
chr1 160680340 160680352 IRF1 JASPAR yes 118385213
chr1 160680375 160680379 H1TF2 TRANSFAC yes 118385214
chr1 160680375 160680379 NFE TRANSFAC yes 118385215
chr1 160680375 160680379 SRF TRANSFAC yes 118385216
chr1 160680375 160680393 NFYA JASPAR yes 118385217
chr1 160680378 160680394 NFYA JASPAR yes 118385218
chr1 160680385 160680391 NFIC JASPAR yes 118385219
chr1 160680403 160680407 H1TF2 TRANSFAC yes 118385220
chr1 160680403 160680407 NFE TRANSFAC yes 118385221
chr1 160680403 160680407 SRF TRANSFAC yes 118385222
chr1 160680403 160680409 NFYC TRANSFAC yes 118385223
chr1 160680435 160680439 H1TF2 TRANSFAC yes 118385224
chr1 160680435 160680439 NFE TRANSFAC yes 118385225
chr1 160680435 160680439 SRF TRANSFAC yes 118385226
chr1 160680441 160680452 ESRRA JASPAR yes 118385227
chr1 160680441 160680452 ESRRB JASPAR yes 118385228
chr1 160680444 160680461 RARA JASPAR yes 118385229
chr1 160680445 160680449 ESR1 TRANSFAC yes 118385230
chr1 160680452 160680456 H1TF2 TRANSFAC yes 118385231
chr1 160680452 160680456 NFE TRANSFAC yes 118385232
chr1 160680452 160680456 SRF TRANSFAC yes 118385233
chr1 160680464 160680475 BATF JASPAR yes 118385234
chr1 160680466 160680477 FOSL1 JASPAR yes 118385235
chr1 160680468 160680475 JUN TRANSFAC yes 118385236
SNP sites on vista3611[chr1:160680120-160680523]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 160680184 rs143145026 G GCCCGGGTTATATAA
POLR2A
667542
chr1 160680184 rs184461353 G A
POLR2A
667543
chr1 160680193 rs571425700 T A
POLR2A TEAD2
667544
chr1 160680439 rs352683 A G
H1TF2 NFE POLR2A SRF
667545
chr1 160680498 rs79782425 G A
POLR2A
667546
Genes possibly regulated by vista3611[chr1:160680120-160680523]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 160577890 160617085 - SLAMF1 ENSG00000117090.10 160617085 0.94 0.96 1457 36965
chr1 160648536 160681641 - CD48 ENSG00000117091.5 160681641 0.95 0.99 1458 98882
chr1 160709037 160724611 + SLAMF7 ENSG00000026751.12 160709037 0.94 0.99 1459 71486
chr1 160765864 160798051 + LY9 ENSG00000122224.13 160765864 0.96 0.99 1460 14659
Expression level of Genes
Back to top
miRNAs possibly regulated by vista3611[chr1:160680120-160680523]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results