EnhancerDB
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  3. vista362[chr1:11559549-11559947]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista362[chr1:11559549-11559947]
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Tissue distribution of vista362
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Transcription factor that possibly regulate vista362[chr1:11559549-11559947]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 11559573 11559587 SPI1 JASPAR yes 118230295
chr1 11559579 11559584 ETS2 TRANSFAC yes 118230296
chr1 11559584 11559595 HOXA10 JASPAR yes 118230297
chr1 11559585 11559595 GSX2 JASPAR yes 118230298
chr1 11559585 11559595 HOXB2 JASPAR yes 118230299
chr1 11559585 11559595 HOXB3 JASPAR yes 118230300
chr1 11559585 11559595 MNX1 JASPAR yes 118230301
chr1 11559585 11559595 POU6F1 JASPAR yes 118230302
chr1 11559586 11559594 LMX1A JASPAR yes 118230303
chr1 11559586 11559594 LMX1B JASPAR yes 118230304
chr1 11559586 11559594 NKX6-1 JASPAR yes 118230305
chr1 11559586 11559594 NKX6-2 JASPAR yes 118230306
chr1 11559586 11559594 VAX1 JASPAR yes 118230307
chr1 11559586 11559594 VAX2 JASPAR yes 118230308
chr1 11559586 11559594 VSX1 JASPAR yes 118230309
chr1 11559586 11559594 VSX2 JASPAR yes 118230310
chr1 11559590 11559601 PROP1 JASPAR yes 118230311
chr1 11559591 11559595 YY1 TRANSFAC yes 118230312
chr1 11559596 11559600 YY1 TRANSFAC yes 118230313
chr1 11559610 11559626 POU4F2 JASPAR yes 118230314
chr1 11559610 11559626 POU4F3 JASPAR yes 118230315
chr1 11559660 11559670 GABPA JASPAR yes 118230316
chr1 11559662 11559668 ETS1 JASPAR yes 118230317
chr1 11559662 11559668 SPI1 JASPAR yes 118230318
chr1 11559675 11559681 SP1 TRANSFAC yes 118230319
chr1 11559675 11559685 SP1 JASPAR yes 118230320
chr1 11559675 11559696 ZNF263 JASPAR yes 118230321
chr1 11559678 11559699 ZNF263 JASPAR yes 118230322
chr1 11559696 11559707 BATF JASPAR yes 118230323
chr1 11559704 11559725 IRF1 JASPAR yes 118230324
chr1 11559705 11559726 ZNF263 JASPAR yes 118230325
chr1 11559706 11559711 ETS2 TRANSFAC yes 118230326
chr1 11559706 11559721 STAT2 JASPAR yes 118230327
chr1 11559707 11559721 SPIC JASPAR yes 118230328
chr1 11559708 11559722 IRF8 JASPAR yes 118230329
chr1 11559708 11559723 IRF9 JASPAR yes 118230330
chr1 11559712 11559727 STAT2 JASPAR yes 118230331
chr1 11559717 11559738 IRF1 JASPAR yes 118230332
chr1 11559723 11559729 TCF4 TRANSFAC yes 118230333
chr1 11559732 11559745 POU2F2 JASPAR yes 118230334
chr1 11559734 11559738 YY1 TRANSFAC yes 118230335
chr1 11559734 11559746 POU2F1 JASPAR yes 118230336
chr1 11559735 11559742 POU2F1 TRANSFAC yes 118230337
chr1 11559735 11559742 POU2F2C TRANSFAC yes 118230338
chr1 11559735 11559742 POU2F2 TRANSFAC yes 118230339
chr1 11559735 11559744 POU5F1B JASPAR yes 118230340
chr1 11559741 11559762 ZNF263 JASPAR yes 118230341
chr1 11559750 11559771 ZNF263 JASPAR yes 118230342
chr1 11559762 11559783 ZNF263 JASPAR yes 118230343
chr1 11559771 11559786 PRDM1 JASPAR yes 118230344
chr1 11559777 11559798 ZNF263 JASPAR yes 118230345
chr1 11559783 11559796 SMAD2 JASPAR yes 118230346
chr1 11559785 11559806 ZNF263 JASPAR yes 118230347
chr1 11559799 11559806 SPIB JASPAR yes 118230348
chr1 11559804 11559808 NFE TRANSFAC yes 118230349
chr1 11559807 11559828 IRF1 JASPAR yes 118230350
chr1 11559809 11559824 STAT2 JASPAR yes 118230351
chr1 11559810 11559814 NFE TRANSFAC yes 118230352
chr1 11559810 11559831 ZNF263 JASPAR yes 118230353
chr1 11559818 11559829 E2F6 JASPAR yes 118230354
chr1 11559820 11559841 ZNF263 JASPAR yes 118230355
chr1 11559823 11559844 ZNF263 JASPAR yes 118230356
chr1 11559827 11559833 ETS1 JASPAR yes 118230357
chr1 11559827 11559833 SPI1 JASPAR yes 118230358
chr1 11559847 11559862 PRDM1 JASPAR yes 118230359
chr1 11559848 11559865 BCL6B JASPAR yes 118230360
chr1 11559874 11559884 GABPA JASPAR yes 118230361
chr1 11559874 11559887 ELF1 JASPAR yes 118230362
chr1 11559892 11559902 ALX3 JASPAR yes 118230363
chr1 11559892 11559902 MIXL1 JASPAR yes 118230364
chr1 11559893 11559901 LHX9 JASPAR yes 118230365
chr1 11559893 11559901 SHOX JASPAR yes 118230366
chr1 11559896 11559901 MYB TRANSFAC yes 118230367
chr1 11559938 11559942 YY1 TRANSFAC yes 118230368
SNP sites on vista362[chr1:11559549-11559947]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 11559688 rs553954934 C T
ZNF263
79533
chr1 11559756 rs147952953 C T
ZNF263
79534
chr1 11559786 rs58242122 GTCTC G
PRDM1 SMAD2 ZNF263
79535
chr1 11559786 rs796719948 GTCTC G
PRDM1 SMAD2 ZNF263
79536
chr1 11559833 rs79807130 G A
ETS1 SPI1 ZNF263
79537
Genes possibly regulated by vista362[chr1:11559549-11559947]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 11539223 11597641 + PTCHD2 ENSG00000204624.6 11539223 0.89 1.0 150 79674
Expression level of Genes
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miRNAs possibly regulated by vista362[chr1:11559549-11559947]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results