EnhancerDB
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  3. vista3625[chr1:160737478-160737714]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3625[chr1:160737478-160737714]
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Tissue distribution of vista3625
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Transcription factor that possibly regulate vista3625[chr1:160737478-160737714]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 160737285 160738055 POLR2A UCSC Txn Factor no Conserved 107840696
chr1 160737285 160738055 POLR2A UCSC Txn Factor no Conserved 107840697
chr1 160737478 160737482 TEAD2 TRANSFAC yes 32537018
chr1 160737478 160737482 TEAD2 TRANSFAC yes 118386028
chr1 160737508 160737520 PBX1 JASPAR yes 32537019
chr1 160737508 160737520 PBX1 JASPAR yes 118386029
chr1 160737528 160737543 ZIC3 JASPAR yes 32537020
chr1 160737528 160737543 ZIC3 JASPAR yes 118386030
chr1 160737546 160737557 BATF JASPAR yes 32537021
chr1 160737546 160737557 BATF JASPAR yes 118386031
chr1 160737553 160737563 SREBF2 JASPAR yes 32537022
chr1 160737553 160737563 SREBF2 JASPAR yes 118386032
chr1 160737584 160737588 TEAD2 TRANSFAC yes 32537023
chr1 160737584 160737588 TEAD2 TRANSFAC yes 118386033
chr1 160737594 160737611 RXRA JASPAR yes 32537024
chr1 160737594 160737611 RXRA JASPAR yes 118386034
chr1 160737599 160737620 ZNF263 JASPAR yes 32537025
chr1 160737599 160737620 ZNF263 JASPAR yes 118386035
chr1 160737607 160737628 ZNF263 JASPAR yes 32537026
chr1 160737607 160737628 ZNF263 JASPAR yes 118386036
chr1 160737623 160737644 ZNF263 JASPAR yes 32537027
chr1 160737623 160737644 ZNF263 JASPAR yes 118386037
chr1 160737642 160737648 TCF4 TRANSFAC yes 32537028
chr1 160737642 160737648 TCF4 TRANSFAC yes 118386038
chr1 160737651 160737666 AR JASPAR yes 32537029
chr1 160737651 160737666 AR JASPAR yes 118386039
chr1 160737659 160737670 E2F6 JASPAR yes 32537030
chr1 160737659 160737670 E2F6 JASPAR yes 118386040
chr1 160737674 160737690 ZNF143 JASPAR yes 32537031
chr1 160737674 160737690 ZNF143 JASPAR yes 118386041
chr1 160737676 160737696 TP63 JASPAR yes 32537032
chr1 160737676 160737696 TP63 JASPAR yes 118386042
chr1 160737677 160737695 TP53 JASPAR yes 32537033
chr1 160737677 160737695 TP73 JASPAR yes 32537034
chr1 160737677 160737695 TP53 JASPAR yes 118386043
chr1 160737677 160737695 TP73 JASPAR yes 118386044
chr1 160737678 160737693 TP53 JASPAR yes 32537035
chr1 160737678 160737693 TP53 JASPAR yes 118386045
chr1 160737679 160737694 TP53 JASPAR yes 32537036
chr1 160737679 160737694 TP53 JASPAR yes 118386046
chr1 160737699 160737705 MZF1 JASPAR yes 32537037
chr1 160737699 160737705 MZF1 JASPAR yes 118386047
SNP sites on vista3625[chr1:160737478-160737714]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 160737532 rs539288051 T A
POLR2A ZIC3
668114
chr1 160737562 rs148927539 AC A
POLR2A SREBF2
668115
chr1 160737568 rs522606 A G
POLR2A
668116
chr1 160737621 rs546757 G A
POLR2A ZNF263
668117
Genes possibly regulated by vista3625[chr1:160737478-160737714]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 160648536 160681641 - CD48 ENSG00000117091.5 160681641 0.95 0.99 1458 44163
chr1 160709037 160724611 + SLAMF7 ENSG00000026751.12 160709037 0.94 0.99 1459 71559
chr1 160765864 160798051 + LY9 ENSG00000122224.13 160765864 0.96 0.99 1460 71850
chr1 160799950 160832692 - CD244 ENSG00000122223.8 160832692 0.93 0.96 1461 5022
Expression level of Genes
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miRNAs possibly regulated by vista3625[chr1:160737478-160737714]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results