EnhancerDB
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  3. vista3647[chr1:161320542-161320880]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3647[chr1:161320542-161320880]
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Tissue distribution of vista3647
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Transcription factor that possibly regulate vista3647[chr1:161320542-161320880]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 161320538 161320544 SOX10 JASPAR yes 32558964
chr1 161320538 161320544 SOX10 JASPAR yes 118387241
chr1 161320556 161320562 HiNF-A TRANSFAC yes 32558965
chr1 161320556 161320562 HiNF-A TRANSFAC yes 118387242
chr1 161320560 161320570 TEAD1 JASPAR yes 32558966
chr1 161320560 161320570 TEAD4 JASPAR yes 32558967
chr1 161320560 161320570 TEAD1 JASPAR yes 118387243
chr1 161320560 161320570 TEAD4 JASPAR yes 118387244
chr1 161320574 161320578 YY1 TRANSFAC yes 32558968
chr1 161320574 161320578 YY1 TRANSFAC yes 118387245
chr1 161320592 161320607 STAT2 JASPAR yes 32558969
chr1 161320592 161320607 STAT2 JASPAR yes 118387246
chr1 161320593 161320603 ETV6 JASPAR yes 32558970
chr1 161320593 161320603 ETV6 JASPAR yes 118387247
chr1 161320593 161320607 SPI1 JASPAR yes 32558971
chr1 161320593 161320607 SPIC JASPAR yes 32558972
chr1 161320593 161320607 SPI1 JASPAR yes 118387248
chr1 161320593 161320607 SPIC JASPAR yes 118387249
chr1 161320642 161320652 GBX2 JASPAR yes 32558973
chr1 161320642 161320652 MNX1 JASPAR yes 32558974
chr1 161320642 161320652 GBX2 JASPAR yes 118387250
chr1 161320642 161320652 MNX1 JASPAR yes 118387251
chr1 161320643 161320651 BARX1 JASPAR yes 32558975
chr1 161320643 161320651 BSX JASPAR yes 32558976
chr1 161320643 161320651 ISL2 JASPAR yes 32558977
chr1 161320643 161320651 LMX1B JASPAR yes 32558978
chr1 161320643 161320651 MSX1 JASPAR yes 32558979
chr1 161320643 161320651 MSX2 JASPAR yes 32558980
chr1 161320643 161320651 BARX1 JASPAR yes 118387252
chr1 161320643 161320651 BSX JASPAR yes 118387253
chr1 161320643 161320651 ISL2 JASPAR yes 118387254
chr1 161320643 161320651 LMX1B JASPAR yes 118387255
chr1 161320643 161320651 MSX1 JASPAR yes 118387256
chr1 161320643 161320651 MSX2 JASPAR yes 118387257
chr1 161320644 161320655 PHOX2A JASPAR yes 32558981
chr1 161320644 161320655 PHOX2A JASPAR yes 118387258
chr1 161320664 161320677 EOMES JASPAR yes 32558982
chr1 161320664 161320677 EOMES JASPAR yes 118387259
chr1 161320666 161320676 TBR1 JASPAR yes 32558983
chr1 161320666 161320676 TBR1 JASPAR yes 118387260
chr1 161320666 161320677 TBX20 JASPAR yes 32558984
chr1 161320666 161320677 TBX2 JASPAR yes 32558985
chr1 161320666 161320677 TBX20 JASPAR yes 118387261
chr1 161320666 161320677 TBX2 JASPAR yes 118387262
chr1 161320667 161320677 TBX21 JASPAR yes 32558986
chr1 161320667 161320677 TBX21 JASPAR yes 118387263
chr1 161320671 161320681 ERG JASPAR yes 32558987
chr1 161320671 161320681 ETV3 JASPAR yes 32558988
chr1 161320671 161320681 ETV4 JASPAR yes 32558989
chr1 161320671 161320681 ETV5 JASPAR yes 32558990
chr1 161320671 161320681 FEV JASPAR yes 32558991
chr1 161320671 161320681 ERG JASPAR yes 118387264
chr1 161320671 161320681 ETV3 JASPAR yes 118387265
chr1 161320671 161320681 ETV4 JASPAR yes 118387266
chr1 161320671 161320681 ETV5 JASPAR yes 118387267
chr1 161320671 161320681 FEV JASPAR yes 118387268
chr1 161320671 161320682 SPDEF JASPAR yes 32558992
chr1 161320671 161320682 SPDEF JASPAR yes 118387269
chr1 161320693 161320697 YY1 TRANSFAC yes 32558993
chr1 161320693 161320697 YY1 TRANSFAC yes 118387270
chr1 161320709 161320720 EBF1 JASPAR yes 32558994
chr1 161320709 161320720 EBF1 JASPAR yes 118387271
chr1 161320710 161320721 EBF1 JASPAR yes 32558995
chr1 161320710 161320721 EBF1 JASPAR yes 118387272
chr1 161320714 161320724 SP1 JASPAR yes 32558996
chr1 161320714 161320724 SP1 JASPAR yes 118387273
chr1 161320716 161320722 MAZ TRANSFAC yes 32558997
chr1 161320716 161320722 MAZ TRANSFAC yes 118387274
chr1 161320717 161320727 MZF1 JASPAR yes 32558998
chr1 161320717 161320727 MZF1 JASPAR yes 118387275
chr1 161320721 161320725 LFA1 TRANSFAC yes 32558999
chr1 161320721 161320725 LFA1 TRANSFAC yes 118387276
chr1 161320768 161320789 IRF1 JASPAR yes 32559000
chr1 161320768 161320789 IRF1 JASPAR yes 118387277
chr1 161320771 161320789 SRF JASPAR yes 32559001
chr1 161320771 161320789 SRF JASPAR yes 118387278
chr1 161320773 161320794 IRF1 JASPAR yes 32559002
chr1 161320773 161320794 IRF1 JASPAR yes 118387279
chr1 161320774 161320789 LEF1 JASPAR yes 32559003
chr1 161320774 161320789 LEF1 JASPAR yes 118387280
chr1 161320774 161320795 IRF1 JASPAR yes 32559004
chr1 161320774 161320795 IRF1 JASPAR yes 118387281
chr1 161320777 161320791 SPIC JASPAR yes 32559005
chr1 161320777 161320791 SPIC JASPAR yes 118387282
chr1 161320780 161320795 FOXP1 JASPAR yes 32559006
chr1 161320780 161320795 FOXP1 JASPAR yes 118387283
chr1 161320782 161320787 ETS2 TRANSFAC yes 32559007
chr1 161320782 161320787 ETS2 TRANSFAC yes 118387284
chr1 161320801 161320806 ETS2 TRANSFAC yes 32559008
chr1 161320801 161320806 ETS2 TRANSFAC yes 118387285
chr1 161320805 161320817 FOXI1 JASPAR yes 32559009
chr1 161320805 161320817 FOXI1 JASPAR yes 118387286
chr1 161320807 161320823 SOX8 JASPAR yes 32559010
chr1 161320807 161320823 SOX8 JASPAR yes 118387287
chr1 161320816 161320831 FOXP1 JASPAR yes 32559011
chr1 161320816 161320831 FOXP1 JASPAR yes 118387288
chr1 161320817 161320828 FOXP2 JASPAR yes 32559012
chr1 161320817 161320828 FOXP2 JASPAR yes 118387289
chr1 161320817 161320829 FOXC2 JASPAR yes 32559013
chr1 161320817 161320829 FOXC2 JASPAR yes 118387290
chr1 161320818 161320826 FOXG1 JASPAR yes 32559014
chr1 161320818 161320826 FOXG1 JASPAR yes 118387291
chr1 161320819 161320830 FOXA1 JASPAR yes 32559015
chr1 161320819 161320830 FOXH1 JASPAR yes 32559016
chr1 161320819 161320830 FOXA1 JASPAR yes 118387292
chr1 161320819 161320830 FOXH1 JASPAR yes 118387293
chr1 161320851 161320856 MYB TRANSFAC yes 32559017
chr1 161320851 161320856 MYB TRANSFAC yes 118387294
chr1 161320866 161320874 HOXA5 JASPAR yes 32559018
chr1 161320866 161320874 HOXA5 JASPAR yes 118387295
chr1 161320873 161320878 GATA2 JASPAR yes 32559019
chr1 161320873 161320878 GATA2 JASPAR yes 118387296
SNP sites on vista3647[chr1:161320542-161320880]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 161320607 rs55694670 C T
SPI1 SPIC STAT2
671230
chr1 161320678 rs56295395 C T
ERG ETV3 ETV4 ETV5 FEV SPDEF
671231
chr1 161320863 rs141231957 A G no 671232
Genes possibly regulated by vista3647[chr1:161320542-161320880]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 161228517 161255240 + PCP4L1 ENSG00000248485.1 161228517 0.89 1.0 1486 7975
chr1 161274525 161279762 - MPZ ENSG00000158887.11 161279762 0.83 0.99 1487 59220
chr1 161284047 161332984 + SDHC ENSG00000143252.10 161284047 0.77 0.99 1488 63505
chr1 161334521 161337664 - C1orf192 ENSG00000188931.3 161337664 0.9 1.0 1489 83216
Expression level of Genes
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miRNAs possibly regulated by vista3647[chr1:161320542-161320880]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results