EnhancerDB
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  3. vista36472[chr20:35362274-35362463]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista36472[chr20:35362274-35362463]
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Tissue distribution of vista36472
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Transcription factor that possibly regulate vista36472[chr20:35362274-35362463]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr20 35362100 35362380 PAX5 UCSC Txn Factor no Conserved 108453359
chr20 35362273 35362284 FOXA1 JASPAR yes 51052609
chr20 35362273 35362284 FOXA1 JASPAR yes 113974268
chr20 35362273 35362288 FOXA1 JASPAR yes 51052610
chr20 35362273 35362288 FOXA1 JASPAR yes 113974269
chr20 35362274 35362286 FOXC2 JASPAR yes 51052611
chr20 35362274 35362286 FOXC2 JASPAR yes 113974270
chr20 35362291 35362306 PRDM1 JASPAR yes 51052612
chr20 35362291 35362306 PRDM1 JASPAR yes 113974271
chr20 35362305 35362319 TCF7L2 JASPAR yes 51052613
chr20 35362305 35362319 TCF7L2 JASPAR yes 113974272
chr20 35362322 35362333 BATF JASPAR yes 51052614
chr20 35362322 35362333 BATF JASPAR yes 113974273
chr20 35362324 35362335 FOS JASPAR yes 51052615
chr20 35362324 35362335 JUND JASPAR yes 51052616
chr20 35362324 35362335 FOS JASPAR yes 113974274
chr20 35362324 35362335 JUND JASPAR yes 113974275
chr20 35362325 35362334 JDP2 JASPAR yes 51052617
chr20 35362325 35362334 JDP2 JASPAR yes 113974276
chr20 35362326 35362332 JUN TRANSFAC yes 51052618
chr20 35362326 35362332 JUN TRANSFAC yes 113974277
chr20 35362334 35362338 YY1 TRANSFAC yes 51052619
chr20 35362334 35362338 YY1 TRANSFAC yes 113974278
chr20 35362343 35362353 NFATC3 JASPAR yes 51052620
chr20 35362343 35362353 NFATC3 JASPAR yes 113974279
chr20 35362348 35362352 H1TF2 TRANSFAC yes 51052621
chr20 35362348 35362352 NFE TRANSFAC yes 51052622
chr20 35362348 35362352 SRF TRANSFAC yes 51052623
chr20 35362348 35362352 H1TF2 TRANSFAC yes 113974280
chr20 35362348 35362352 NFE TRANSFAC yes 113974281
chr20 35362348 35362352 SRF TRANSFAC yes 113974282
chr20 35362365 35362377 HNF1B JASPAR yes 51052624
chr20 35362365 35362377 HNF1B JASPAR yes 113974283
chr20 35362369 35362373 YY1 TRANSFAC yes 51052625
chr20 35362369 35362373 YY1 TRANSFAC yes 113974284
chr20 35362373 35362376 MYB TRANSFAC yes 51052626
chr20 35362373 35362376 MYB TRANSFAC yes 113974285
chr20 35362384 35362392 RHOXF1 JASPAR yes 51052627
chr20 35362384 35362392 RHOXF1 JASPAR yes 113974286
chr20 35362395 35362401 YY1 JASPAR yes 51052628
chr20 35362395 35362401 YY1 JASPAR yes 113974287
chr20 35362395 35362412 ESR1 JASPAR yes 51052629
chr20 35362395 35362412 ESR1 JASPAR yes 113974288
chr20 35362395 35362413 ESR2 JASPAR yes 51052630
chr20 35362395 35362413 ESR2 JASPAR yes 113974289
chr20 35362399 35362413 MTF1 JASPAR yes 51052631
chr20 35362399 35362413 MTF1 JASPAR yes 113974290
chr20 35362400 35362405 MYC TRANSFAC yes 51052632
chr20 35362400 35362405 MYC TRANSFAC yes 113974291
chr20 35362425 35362438 JUN JASPAR yes 51052633
chr20 35362425 35362438 JUN JASPAR yes 113974292
chr20 35362426 35362442 RFX2 JASPAR yes 51052634
chr20 35362426 35362442 RFX3 JASPAR yes 51052635
chr20 35362426 35362442 RFX4 JASPAR yes 51052636
chr20 35362426 35362442 RFX2 JASPAR yes 113974293
chr20 35362426 35362442 RFX3 JASPAR yes 113974294
chr20 35362426 35362442 RFX4 JASPAR yes 113974295
chr20 35362427 35362446 RFX2 JASPAR yes 51052637
chr20 35362427 35362446 RFX2 JASPAR yes 113974296
SNP sites on vista36472[chr20:35362274-35362463]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista36472[chr20:35362274-35362463]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr20 35240721 35274619 - SLA2 ENSG00000101082.9 35274619 0.94 1.0 18462 12345
chr20 35280169 35374481 - NDRG3 ENSG00000101079.16 35374481 0.62 1.0 18463 87982
chr20 35380194 35402221 - DSN1 ENSG00000149636.11 35402221 0.66 0.99 18464 60242
Expression level of Genes
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miRNAs possibly regulated by vista36472[chr20:35362274-35362463]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results