EnhancerDB
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  3. vista36477[chr20:35583660-35583902]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista36477[chr20:35583660-35583902]
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Tissue distribution of vista36477
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Transcription factor that possibly regulate vista36477[chr20:35583660-35583902]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr20 35583667 35583673 HiNF-A TRANSFAC yes 113974482
chr20 35583671 35583691 ESR1 JASPAR yes 113974483
chr20 35583676 35583691 ESR2 JASPAR yes 113974484
chr20 35583696 35583707 DUX4 JASPAR yes 113974485
chr20 35583721 35583736 FOXP1 JASPAR yes 113974486
chr20 35583724 35583738 ONECUT2 JASPAR yes 113974487
chr20 35583724 35583738 ONECUT3 JASPAR yes 113974488
chr20 35583726 35583735 SRY JASPAR yes 113974489
chr20 35583726 35583744 NR3C1 JASPAR yes 113974490
chr20 35583733 35583747 ONECUT1 JASPAR yes 113974491
chr20 35583733 35583747 ONECUT2 JASPAR yes 113974492
chr20 35583733 35583747 ONECUT3 JASPAR yes 113974493
chr20 35583738 35583748 HESX1 JASPAR yes 113974494
chr20 35583738 35583748 RAX JASPAR yes 113974495
chr20 35583739 35583747 ISX JASPAR yes 113974496
chr20 35583739 35583747 LHX9 JASPAR yes 113974497
chr20 35583739 35583747 LMX1B JASPAR yes 113974498
chr20 35583739 35583747 PRRX1 JASPAR yes 113974499
chr20 35583739 35583747 RAX2 JASPAR yes 113974500
chr20 35583739 35583747 SHOX JASPAR yes 113974501
chr20 35583739 35583747 UNCX JASPAR yes 113974502
chr20 35583740 35583750 PAX3 JASPAR yes 113974503
chr20 35583740 35583751 PHOX2A JASPAR yes 113974504
chr20 35583740 35583751 PROP1 JASPAR yes 113974505
chr20 35583762 35583766 H1TF2 TRANSFAC yes 113974506
chr20 35583762 35583766 NFE TRANSFAC yes 113974507
chr20 35583762 35583766 SRF TRANSFAC yes 113974508
chr20 35583762 35583775 NR2F1 JASPAR yes 113974509
chr20 35583764 35583775 ESRRA JASPAR yes 113974510
chr20 35583764 35583775 ESRRB JASPAR yes 113974511
chr20 35583766 35583776 RORA JASPAR yes 113974512
chr20 35583782 35583802 ESR1 JASPAR yes 113974513
chr20 35583785 35583802 RARA JASPAR yes 113974514
chr20 35583785 35583802 RXRA JASPAR yes 113974515
chr20 35583787 35583802 ESR2 JASPAR yes 113974516
chr20 35583795 35583803 NR4A2 JASPAR yes 113974517
chr20 35583799 35583807 GATA3 JASPAR yes 113974518
chr20 35583799 35583807 GATA5 JASPAR yes 113974519
chr20 35583802 35583817 FOXA1 JASPAR yes 113974520
chr20 35583804 35583816 FOXC2 JASPAR yes 113974521
chr20 35583804 35583818 FOXF2 JASPAR yes 113974522
chr20 35583806 35583810 YY1 TRANSFAC yes 113974523
chr20 35583835 35583839 LFA1 TRANSFAC yes 113974524
chr20 35583840 35583855 MEF2A JASPAR yes 113974525
chr20 35583841 35583856 MEF2C JASPAR yes 113974526
chr20 35583844 35583848 YY1 TRANSFAC yes 113974527
chr20 35583857 35583866 ZEB1 JASPAR yes 113974528
chr20 35583857 35583872 SCRT1 JASPAR yes 113974529
chr20 35583858 35583873 RUNX2 JASPAR yes 113974530
chr20 35583860 35583865 USF2 TRANSFAC yes 113974531
chr20 35583861 35583872 RUNX1 JASPAR yes 113974532
chr20 35583862 35583872 RUNX3 JASPAR yes 113974533
chr20 35583863 35583872 RUNX2 JASPAR yes 113974534
chr20 35583889 35583894 ETS2 TRANSFAC yes 113974535
SNP sites on vista36477[chr20:35583660-35583902]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista36477[chr20:35583660-35583902]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr20 35405845 35492089 - SOGA1 ENSG00000149639.10 35492089 0.71 0.99 18465 8429
chr20 35504524 35522638 + TLDC2 ENSG00000101342.5 35504524 0.78 1.0 18466 20864
chr20 35518632 35580246 - SAMHD1 ENSG00000101347.7 35580246 0.79 0.99 18467 96586
Expression level of Genes
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miRNAs possibly regulated by vista36477[chr20:35583660-35583902]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results