EnhancerDB
  1. Home
  2. Enhancers
  3. vista36486[chr20:35874402-35874620]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista36486[chr20:35874402-35874620]
Back to top
Tissue distribution of vista36486
Back to top
Transcription factor that possibly regulate vista36486[chr20:35874402-35874620]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr20 35874396 35874405 NKX2-8 JASPAR yes 51073337
chr20 35874396 35874405 NKX2-8 JASPAR yes 113974886
chr20 35874396 35874406 NKX2-3 JASPAR yes 51073338
chr20 35874396 35874406 NKX2-3 JASPAR yes 113974887
chr20 35874404 35874415 USF2 JASPAR yes 51073339
chr20 35874404 35874415 USF2 JASPAR yes 113974888
chr20 35874406 35874415 SNAI2 JASPAR yes 51073340
chr20 35874406 35874415 SNAI2 JASPAR yes 113974889
chr20 35874407 35874412 USF2 TRANSFAC yes 51073341
chr20 35874407 35874412 USF2 TRANSFAC yes 113974890
chr20 35874455 35874464 SOX9 JASPAR yes 51073342
chr20 35874455 35874464 SOX9 JASPAR yes 113974891
chr20 35874487 35874501 PLAG1 JASPAR yes 51073343
chr20 35874487 35874501 PLAG1 JASPAR yes 113974892
chr20 35874494 35874508 GLIS2 JASPAR yes 51073344
chr20 35874494 35874508 ZIC1 JASPAR yes 51073345
chr20 35874494 35874508 GLIS2 JASPAR yes 113974893
chr20 35874494 35874508 ZIC1 JASPAR yes 113974894
chr20 35874494 35874509 ZIC4 JASPAR yes 51073346
chr20 35874494 35874509 ZIC4 JASPAR yes 113974895
chr20 35874551 35874560 SNAI2 JASPAR yes 51073347
chr20 35874551 35874560 SNAI2 JASPAR yes 113974896
chr20 35874551 35874561 FIGLA JASPAR yes 51073348
chr20 35874551 35874561 MSC JASPAR yes 51073349
chr20 35874551 35874561 TCF3 JASPAR yes 51073350
chr20 35874551 35874561 FIGLA JASPAR yes 113974897
chr20 35874551 35874561 MSC JASPAR yes 113974898
chr20 35874551 35874561 TCF3 JASPAR yes 113974899
chr20 35874556 35874571 HNF4A JASPAR yes 51073351
chr20 35874556 35874571 HNF4A JASPAR yes 113974900
chr20 35874572 35874577 ETS2 TRANSFAC yes 51073352
chr20 35874572 35874577 ETS2 TRANSFAC yes 113974901
chr20 35874596 35874611 RFX5 JASPAR yes 51073353
chr20 35874596 35874611 RFX5 JASPAR yes 113974902
chr20 35874607 35874622 HNF4A JASPAR yes 51073354
chr20 35874607 35874622 HNF4A JASPAR yes 113974903
SNP sites on vista36486[chr20:35874402-35874620]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista36486[chr20:35874402-35874620]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr20 35729629 35807991 - MROH8 ENSG00000101353.10 35807991 0.78 1.0 18470 33589
chr20 35806813 35870022 + RPN2 ENSG00000118705.12 35806813 0.58 1.0 18471 32411
chr20 35879489 35890238 - GHRH ENSG00000118702.5 35890238 0.99 0.0 18472 84382
chr20 35918041 35945663 + MANBAL ENSG00000101363.8 35918041 0.68 1.0 18473 56579
chr20 35973088 36034453 + SRC ENSG00000197122.7 35973088 0.72 1.0 18474 1532
Expression level of Genes
Back to top
miRNAs possibly regulated by vista36486[chr20:35874402-35874620]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results