EnhancerDB
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  3. vista3649[chr1:161324130-161324422]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3649[chr1:161324130-161324422]
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Tissue distribution of vista3649
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Transcription factor that possibly regulate vista3649[chr1:161324130-161324422]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 161324172 161324184 TAL1 JASPAR yes 118387358
chr1 161324172 161324185 ZBTB18 JASPAR yes 118387359
chr1 161324174 161324184 MYF6 JASPAR yes 118387360
chr1 161324174 161324184 NEUROG2 JASPAR yes 118387361
chr1 161324174 161324184 OLIG1 JASPAR yes 118387362
chr1 161324174 161324184 OLIG3 JASPAR yes 118387363
chr1 161324174 161324186 TAL1 JASPAR yes 118387364
chr1 161324183 161324190 NKX3-1 JASPAR yes 118387365
chr1 161324198 161324212 POU1F1 JASPAR yes 118387366
chr1 161324199 161324211 POU3F1 JASPAR yes 118387367
chr1 161324199 161324211 POU3F2 JASPAR yes 118387368
chr1 161324199 161324212 POU3F3 JASPAR yes 118387369
chr1 161324200 161324204 YY1 TRANSFAC yes 118387370
chr1 161324200 161324212 POU2F1 JASPAR yes 118387371
chr1 161324201 161324210 POU3F4 JASPAR yes 118387372
chr1 161324201 161324210 POU5F1B JASPAR yes 118387373
chr1 161324206 161324218 POU2F1 JASPAR yes 118387374
chr1 161324206 161324219 POU3F3 JASPAR yes 118387375
chr1 161324206 161324220 POU1F1 JASPAR yes 118387376
chr1 161324207 161324219 POU3F1 JASPAR yes 118387377
chr1 161324207 161324219 POU3F2 JASPAR yes 118387378
chr1 161324207 161324220 POU2F2 JASPAR yes 118387379
chr1 161324208 161324216 FOXL1 JASPAR yes 118387380
chr1 161324208 161324217 POU5F1B JASPAR yes 118387381
chr1 161324217 161324222 GATA2 JASPAR yes 118387382
chr1 161324244 161324259 TFAP2C JASPAR yes 118387383
chr1 161324247 161324259 TFAP2A JASPAR yes 118387384
chr1 161324247 161324259 TFAP2B JASPAR yes 118387385
chr1 161324247 161324259 TFAP2C JASPAR yes 118387386
chr1 161324249 161324258 TFAP2A JASPAR yes 118387387
chr1 161324254 161324258 LFA1 TRANSFAC yes 118387388
chr1 161324264 161324278 MTF1 JASPAR yes 118387389
chr1 161324274 161324289 RUNX2 JASPAR yes 118387390
chr1 161324275 161324284 RUNX2 JASPAR yes 118387391
chr1 161324275 161324285 RUNX3 JASPAR yes 118387392
chr1 161324275 161324286 RUNX1 JASPAR yes 118387393
chr1 161324292 161324300 RHOXF1 JASPAR yes 118387394
chr1 161324303 161324307 NFE TRANSFAC yes 118387395
chr1 161324320 161324340 RREB1 JASPAR yes 118387396
chr1 161324324 161324335 TBX20 JASPAR yes 118387397
chr1 161324331 161324341 GCM2 JASPAR yes 118387398
chr1 161324331 161324342 GCM1 JASPAR yes 118387399
chr1 161324353 161324359 MZF1 JASPAR yes 118387400
chr1 161324362 161324366 YY1 TRANSFAC yes 118387401
chr1 161324370 161324387 ZNF410 JASPAR yes 118387402
chr1 161324372 161324387 STAT1 JASPAR yes 118387403
chr1 161324374 161324385 STAT1 JASPAR yes 118387404
chr1 161324382 161324395 ZBTB18 JASPAR yes 118387405
chr1 161324393 161324414 IRF1 JASPAR yes 118387406
chr1 161324395 161324416 IRF1 JASPAR yes 118387407
chr1 161324396 161324411 FOXP1 JASPAR yes 118387408
chr1 161324396 161324417 IRF1 JASPAR yes 118387409
chr1 161324397 161324412 FOXP1 JASPAR yes 118387410
chr1 161324397 161324418 IRF1 JASPAR yes 118387411
chr1 161324401 161324422 IRF1 JASPAR yes 118387412
chr1 161324402 161324417 FOXP1 JASPAR yes 118387413
chr1 161324404 161324419 FOXP1 JASPAR yes 118387414
chr1 161324406 161324421 FOXP1 JASPAR yes 118387415
chr1 161324407 161324422 FOXP1 JASPAR yes 118387416
SNP sites on vista3649[chr1:161324130-161324422]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 161324228 rs12097837 G C no 671259
Genes possibly regulated by vista3649[chr1:161324130-161324422]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 161228517 161255240 + PCP4L1 ENSG00000248485.1 161228517 0.89 1.0 1486 4387
chr1 161274525 161279762 - MPZ ENSG00000158887.11 161279762 0.83 0.99 1487 55632
chr1 161284047 161332984 + SDHC ENSG00000143252.10 161284047 0.77 0.99 1488 59917
chr1 161334521 161337664 - C1orf192 ENSG00000188931.3 161337664 0.9 1.0 1489 86758
Expression level of Genes
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miRNAs possibly regulated by vista3649[chr1:161324130-161324422]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results