EnhancerDB
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  3. vista3650[chr1:161329163-161329482]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3650[chr1:161329163-161329482]
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Tissue distribution of vista3650
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Transcription factor that possibly regulate vista3650[chr1:161329163-161329482]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 161329152 161329163 DMRT3 JASPAR yes 32559751
chr1 161329152 161329163 DMRT3 JASPAR yes 118387417
chr1 161329165 161329177 TFAP2B JASPAR yes 32559752
chr1 161329165 161329177 TFAP2C JASPAR yes 32559753
chr1 161329165 161329177 TFAP2B JASPAR yes 118387418
chr1 161329165 161329177 TFAP2C JASPAR yes 118387419
chr1 161329165 161329180 TFAP2A JASPAR yes 32559754
chr1 161329165 161329180 TFAP2C JASPAR yes 32559755
chr1 161329165 161329180 TFAP2A JASPAR yes 118387420
chr1 161329165 161329180 TFAP2C JASPAR yes 118387421
chr1 161329166 161329177 EBF1 JASPAR yes 32559756
chr1 161329166 161329177 TFAP2A JASPAR yes 32559757
chr1 161329166 161329177 TFAP2B JASPAR yes 32559758
chr1 161329166 161329177 TFAP2C JASPAR yes 32559759
chr1 161329166 161329177 EBF1 JASPAR yes 118387422
chr1 161329166 161329177 TFAP2A JASPAR yes 118387423
chr1 161329166 161329177 TFAP2B JASPAR yes 118387424
chr1 161329166 161329177 TFAP2C JASPAR yes 118387425
chr1 161329167 161329176 TFAP2A JASPAR yes 32559760
chr1 161329167 161329176 TFAP2A JASPAR yes 118387426
chr1 161329171 161329181 SP1 JASPAR yes 32559761
chr1 161329171 161329181 SP1 JASPAR yes 118387427
chr1 161329172 161329176 LFA1 TRANSFAC yes 32559762
chr1 161329172 161329176 LFA1 TRANSFAC yes 118387428
chr1 161329208 161329223 TFAP2A JASPAR yes 32559763
chr1 161329208 161329223 TFAP2C JASPAR yes 32559764
chr1 161329208 161329223 TFAP2A JASPAR yes 118387429
chr1 161329208 161329223 TFAP2C JASPAR yes 118387430
chr1 161329209 161329222 TFAP2B JASPAR yes 32559765
chr1 161329209 161329222 TFAP2C JASPAR yes 32559766
chr1 161329209 161329222 TFAP2B JASPAR yes 118387431
chr1 161329209 161329222 TFAP2C JASPAR yes 118387432
chr1 161329213 161329223 MZF1 JASPAR yes 32559767
chr1 161329213 161329223 MZF1 JASPAR yes 118387433
chr1 161329216 161329237 ZNF263 JASPAR yes 32559768
chr1 161329216 161329237 ZNF263 JASPAR yes 118387434
chr1 161329219 161329240 ZNF263 JASPAR yes 32559769
chr1 161329219 161329240 ZNF263 JASPAR yes 118387435
chr1 161329229 161329240 E2F6 JASPAR yes 32559770
chr1 161329229 161329240 E2F6 JASPAR yes 118387436
chr1 161329239 161329251 POU3F1 JASPAR yes 32559771
chr1 161329239 161329251 POU3F2 JASPAR yes 32559772
chr1 161329239 161329251 POU3F1 JASPAR yes 118387437
chr1 161329239 161329251 POU3F2 JASPAR yes 118387438
chr1 161329239 161329252 POU3F3 JASPAR yes 32559773
chr1 161329239 161329252 POU3F3 JASPAR yes 118387439
chr1 161329240 161329244 YY1 TRANSFAC yes 32559774
chr1 161329240 161329244 YY1 TRANSFAC yes 118387440
chr1 161329246 161329250 YY1 TRANSFAC yes 32559775
chr1 161329246 161329250 YY1 TRANSFAC yes 118387441
chr1 161329247 161329257 EMX1 JASPAR yes 32559776
chr1 161329247 161329257 HOXB3 JASPAR yes 32559777
chr1 161329247 161329257 MEOX2 JASPAR yes 32559778
chr1 161329247 161329257 EMX1 JASPAR yes 118387442
chr1 161329247 161329257 HOXB3 JASPAR yes 118387443
chr1 161329247 161329257 MEOX2 JASPAR yes 118387444
chr1 161329248 161329256 NKX6-1 JASPAR yes 32559779
chr1 161329248 161329256 NKX6-1 JASPAR yes 118387445
chr1 161329254 161329261 SPI1 JASPAR yes 32559780
chr1 161329254 161329261 SPI1 JASPAR yes 118387446
chr1 161329271 161329277 SOX10 JASPAR yes 32559781
chr1 161329271 161329277 SOX10 JASPAR yes 118387447
chr1 161329289 161329301 NHLH1 JASPAR yes 32559782
chr1 161329289 161329301 NHLH1 JASPAR yes 118387448
chr1 161329290 161329300 TFAP4 JASPAR yes 32559783
chr1 161329290 161329300 TFAP4 JASPAR yes 118387449
chr1 161329300 161329311 FLI1 JASPAR yes 32559784
chr1 161329300 161329311 FLI1 JASPAR yes 118387450
chr1 161329304 161329311 SPIB JASPAR yes 32559785
chr1 161329304 161329311 SPIB JASPAR yes 118387451
chr1 161329313 161329325 SRF JASPAR yes 32559786
chr1 161329313 161329325 SRF JASPAR yes 118387452
chr1 161329316 161329320 YY1 TRANSFAC yes 32559787
chr1 161329316 161329320 YY1 TRANSFAC yes 118387453
chr1 161329345 161329349 YY1 TRANSFAC yes 32559788
chr1 161329345 161329349 YY1 TRANSFAC yes 118387454
chr1 161329352 161329358 SOX10 JASPAR yes 32559789
chr1 161329352 161329358 SOX10 JASPAR yes 118387455
chr1 161329363 161329373 GCM2 JASPAR yes 32559790
chr1 161329363 161329373 GCM2 JASPAR yes 118387456
chr1 161329388 161329392 TEAD2 TRANSFAC yes 32559791
chr1 161329388 161329392 TEAD2 TRANSFAC yes 118387457
chr1 161329388 161329393 TBP TRANSFAC yes 32559792
chr1 161329388 161329393 TBP TRANSFAC yes 118387458
chr1 161329388 161329394 TFIID TRANSFAC yes 32559793
chr1 161329388 161329394 TFIID TRANSFAC yes 118387459
chr1 161329392 161329406 SPI1 JASPAR yes 32559794
chr1 161329392 161329406 SPI1 JASPAR yes 118387460
chr1 161329446 161329452 TCF4 TRANSFAC yes 32559795
chr1 161329446 161329452 TCF4 TRANSFAC yes 118387461
chr1 161329455 161329460 ETS2 TRANSFAC yes 32559796
chr1 161329455 161329460 ETS2 TRANSFAC yes 118387462
chr1 161329474 161329478 H4TF2 TRANSFAC yes 32559797
chr1 161329474 161329478 H4TF2 TRANSFAC yes 118387463
SNP sites on vista3650[chr1:161329163-161329482]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 161329166 rs544967539 T G
EBF1 TFAP2A TFAP2B TFAP2C
671292
chr1 161329175 rs115787002 G T
EBF1 LFA1 SP1 TFAP2A TFAP2B TFAP2C
671293
chr1 161329206 rs16832851 T C no 671294
chr1 161329218 rs185732891 G C
MZF1 TFAP2A TFAP2B TFAP2C ZNF263
671295
chr1 161329289 rs565607457 A C,G
NHLH1
671296
chr1 161329330 rs12730813 A G no 671297
chr1 161329391 rs4634927 T C
TBP TEAD2 TFIID
671298
chr1 161329401 rs4474277 G A
SPI1
671299
chr1 161329474 rs4319356 G A
H4TF2
671300
Genes possibly regulated by vista3650[chr1:161329163-161329482]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 161274525 161279762 - MPZ ENSG00000158887.11 161279762 0.83 0.99 1487 50599
chr1 161284047 161332984 + SDHC ENSG00000143252.10 161284047 0.77 0.99 1488 54884
chr1 161334521 161337664 - C1orf192 ENSG00000188931.3 161337664 0.9 1.0 1489 91818
Expression level of Genes
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miRNAs possibly regulated by vista3650[chr1:161329163-161329482]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results