EnhancerDB
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  3. vista3652[chr1:161352257-161352597]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3652[chr1:161352257-161352597]
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Tissue distribution of vista3652
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Transcription factor that possibly regulate vista3652[chr1:161352257-161352597]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 161351932 161352556 CTCF UCSC Txn Factor no Conserved 107841751
chr1 161351982 161352262 SMC3 UCSC Txn Factor no Conserved 107841755
chr1 161352214 161352732 FOS UCSC Txn Factor no Conserved 107841758
chr1 161352251 161352838 STAT3 UCSC Txn Factor no Conserved 107841759
chr1 161352249 161352264 SOX21 JASPAR yes 32560543
chr1 161352249 161352264 SOX21 JASPAR yes 118387509
chr1 161352256 161352261 GATA2 JASPAR yes 32560544
chr1 161352256 161352261 GATA2 JASPAR yes 118387510
chr1 161352270 161352275 TFAP2A TRANSFAC yes 32560545
chr1 161352270 161352275 TFAP2A TRANSFAC yes 118387511
chr1 161352270 161352276 MZF1 JASPAR yes 32560546
chr1 161352270 161352276 MZF1 JASPAR yes 118387512
chr1 161352285 161352295 HOXA13 JASPAR yes 32560547
chr1 161352285 161352295 HOXB13 JASPAR yes 32560548
chr1 161352285 161352295 HOXD13 JASPAR yes 32560549
chr1 161352285 161352295 HOXA13 JASPAR yes 118387513
chr1 161352285 161352295 HOXB13 JASPAR yes 118387514
chr1 161352285 161352295 HOXD13 JASPAR yes 118387515
chr1 161352285 161352296 HOXC13 JASPAR yes 32560550
chr1 161352285 161352296 HOXC13 JASPAR yes 118387516
chr1 161352289 161352293 TEAD2 TRANSFAC yes 32560551
chr1 161352289 161352293 TEAD2 TRANSFAC yes 118387517
chr1 161352292 161352297 ETS2 TRANSFAC yes 32560552
chr1 161352292 161352297 ETS2 TRANSFAC yes 118387518
chr1 161352302 161352307 GATA2 JASPAR yes 32560553
chr1 161352302 161352307 GATA2 JASPAR yes 118387519
chr1 161352351 161352355 LFA1 TRANSFAC yes 32560554
chr1 161352351 161352355 LFA1 TRANSFAC yes 118387520
chr1 161352355 161352360 ETS2 TRANSFAC yes 32560555
chr1 161352355 161352360 ETS2 TRANSFAC yes 118387521
chr1 161352378 161352384 TBP TRANSFAC yes 32560556
chr1 161352378 161352384 TBP TRANSFAC yes 118387522
chr1 161352381 161352391 TEAD4 JASPAR yes 32560557
chr1 161352381 161352391 TEAD4 JASPAR yes 118387523
chr1 161352396 161352405 THAP1 JASPAR yes 32560558
chr1 161352396 161352405 THAP1 JASPAR yes 118387524
chr1 161352405 161352419 JUN JASPAR yes 32560559
chr1 161352405 161352419 JUN JASPAR yes 118387525
chr1 161352408 161352419 FOSL2 JASPAR yes 32560560
chr1 161352408 161352419 JUNB JASPAR yes 32560561
chr1 161352408 161352419 FOSL2 JASPAR yes 118387526
chr1 161352408 161352419 JUNB JASPAR yes 118387527
chr1 161352408 161352421 NFKB1 JASPAR yes 32560562
chr1 161352408 161352421 NFKB1 JASPAR yes 118387528
chr1 161352409 161352420 FOS JASPAR yes 32560563
chr1 161352409 161352420 JUND JASPAR yes 32560564
chr1 161352409 161352420 FOS JASPAR yes 118387529
chr1 161352409 161352420 JUND JASPAR yes 118387530
chr1 161352410 161352424 JUN JASPAR yes 32560565
chr1 161352410 161352424 JUN JASPAR yes 118387531
chr1 161352426 161352441 AR JASPAR yes 32560566
chr1 161352426 161352441 AR JASPAR yes 118387532
chr1 161352428 161352443 FOXA1 JASPAR yes 32560567
chr1 161352428 161352443 FOXA1 JASPAR yes 118387533
chr1 161352431 161352447 ZNF143 JASPAR yes 32560568
chr1 161352431 161352447 ZNF143 JASPAR yes 118387534
chr1 161352432 161352443 FOXA1 JASPAR yes 32560569
chr1 161352432 161352443 FOXA1 JASPAR yes 118387535
chr1 161352452 161352458 MZF1 JASPAR yes 32560570
chr1 161352452 161352458 MZF1 JASPAR yes 118387536
chr1 161352452 161352465 TFAP2A JASPAR yes 32560571
chr1 161352452 161352465 TFAP2B JASPAR yes 32560572
chr1 161352452 161352465 TFAP2C JASPAR yes 32560573
chr1 161352452 161352465 TFAP2A JASPAR yes 118387537
chr1 161352452 161352465 TFAP2B JASPAR yes 118387538
chr1 161352452 161352465 TFAP2C JASPAR yes 118387539
chr1 161352468 161352472 YY1 TRANSFAC yes 32560574
chr1 161352468 161352472 YY1 TRANSFAC yes 118387540
chr1 161352500 161352521 ZNF263 JASPAR yes 32560575
chr1 161352500 161352521 ZNF263 JASPAR yes 118387541
chr1 161352522 161352526 H4TF2 TRANSFAC yes 32560576
chr1 161352522 161352526 H4TF2 TRANSFAC yes 118387542
chr1 161352533 161352548 JUND JASPAR yes 32560577
chr1 161352533 161352548 JUND JASPAR yes 118387543
chr1 161352534 161352547 JUN JASPAR yes 32560578
chr1 161352534 161352547 JUN JASPAR yes 118387544
chr1 161352535 161352549 ATF7 JASPAR yes 32560579
chr1 161352535 161352549 BATF3 JASPAR yes 32560580
chr1 161352535 161352549 ATF7 JASPAR yes 118387545
chr1 161352535 161352549 BATF3 JASPAR yes 118387546
chr1 161352536 161352548 JDP2 JASPAR yes 32560581
chr1 161352536 161352548 JDP2 JASPAR yes 118387547
chr1 161352536 161352551 JUND JASPAR yes 32560582
chr1 161352536 161352551 JUND JASPAR yes 118387548
chr1 161352541 161352558 RXRA JASPAR yes 32560583
chr1 161352541 161352558 RXRA JASPAR yes 118387549
chr1 161352555 161352575 ESR1 JASPAR yes 32560584
chr1 161352555 161352575 ESR1 JASPAR yes 118387550
chr1 161352559 161352576 NR3C1 JASPAR yes 32560585
chr1 161352559 161352576 NR3C1 JASPAR yes 118387551
chr1 161352559 161352577 ESR2 JASPAR yes 32560586
chr1 161352559 161352577 ESR2 JASPAR yes 118387552
chr1 161352561 161352576 AR JASPAR yes 32560587
chr1 161352561 161352576 AR JASPAR yes 118387553
chr1 161352568 161352572 NFE TRANSFAC yes 32560588
chr1 161352568 161352572 NFE TRANSFAC yes 118387554
chr1 161352587 161352605 ESR1 JASPAR yes 32560589
chr1 161352587 161352605 ESR1 JASPAR yes 118387555
SNP sites on vista3652[chr1:161352257-161352597]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 161352267 rs114844178 G A,C
CTCF FOS STAT3
671375
chr1 161352355 rs188551116 C G
CTCF ETS2 FOS LFA1 STAT3
671376
chr1 161352397 rs144189721 C T
CTCF FOS STAT3 THAP1
671377
chr1 161352403 rs71639062 A T
CTCF FOS STAT3 THAP1
671378
chr1 161352545 rs114611640 C A
ATF7 BATF3 CTCF FOS JDP2 JUN JUND RXRA STAT3
671379
Genes possibly regulated by vista3652[chr1:161352257-161352597]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 161274525 161279762 - MPZ ENSG00000158887.11 161279762 0.83 0.99 1487 27505
chr1 161284047 161332984 + SDHC ENSG00000143252.10 161284047 0.77 0.99 1488 31790
chr1 161334521 161337664 - C1orf192 ENSG00000188931.3 161337664 0.9 1.0 1489 85407
Expression level of Genes
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miRNAs possibly regulated by vista3652[chr1:161352257-161352597]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results