EnhancerDB
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  3. vista3658[chr1:161500608-161500899]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3658[chr1:161500608-161500899]
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Tissue distribution of vista3658
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Transcription factor that possibly regulate vista3658[chr1:161500608-161500899]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 161499961 161500933 POLR2A UCSC Txn Factor no Conserved 107842175
chr1 161500671 161501119 TBP UCSC Txn Factor no Conserved 107842192
chr1 161500674 161501210 RPC155 UCSC Txn Factor no Conserved 107842195
chr1 161500686 161501166 ATF3 UCSC Txn Factor no Conserved 107842200
chr1 161500769 161500895 BDP1 UCSC Txn Factor no Conserved 107842223
chr1 161500865 161501029 GTF3C2 UCSC Txn Factor no Conserved 107842254
chr1 161500600 161500621 ZNF263 JASPAR yes 32567189
chr1 161500600 161500621 ZNF263 JASPAR yes 118388016
chr1 161500615 161500636 ZNF263 JASPAR yes 32567190
chr1 161500615 161500636 ZNF263 JASPAR yes 118388017
chr1 161500618 161500639 ZNF263 JASPAR yes 32567191
chr1 161500618 161500639 ZNF263 JASPAR yes 118388018
chr1 161500630 161500636 PEA3 TRANSFAC yes 32567192
chr1 161500630 161500636 PEA3 TRANSFAC yes 118388019
chr1 161500632 161500643 NFKB1 JASPAR yes 32567193
chr1 161500632 161500643 NFKB1 JASPAR yes 118388020
chr1 161500632 161500645 NFKB1 JASPAR yes 32567194
chr1 161500632 161500645 NFKB2 JASPAR yes 32567195
chr1 161500632 161500645 NFKB1 JASPAR yes 118388021
chr1 161500632 161500645 NFKB2 JASPAR yes 118388022
chr1 161500633 161500643 NFKB1 JASPAR yes 32567196
chr1 161500633 161500643 RELA JASPAR yes 32567197
chr1 161500633 161500643 REL JASPAR yes 32567198
chr1 161500633 161500643 NFKB1 JASPAR yes 118388023
chr1 161500633 161500643 RELA JASPAR yes 118388024
chr1 161500633 161500643 REL JASPAR yes 118388025
chr1 161500633 161500644 NFKB1 JASPAR yes 32567199
chr1 161500633 161500644 NFKB1 JASPAR yes 118388026
chr1 161500634 161500644 NFKB1 JASPAR yes 32567200
chr1 161500634 161500644 REL JASPAR yes 32567201
chr1 161500634 161500644 NFKB1 JASPAR yes 118388027
chr1 161500634 161500644 REL JASPAR yes 118388028
chr1 161500637 161500653 GLIS1 JASPAR yes 32567202
chr1 161500637 161500653 GLIS1 JASPAR yes 118388029
chr1 161500651 161500663 NHLH1 JASPAR yes 32567203
chr1 161500651 161500663 NHLH1 JASPAR yes 118388030
chr1 161500658 161500679 IRF1 JASPAR yes 32567204
chr1 161500658 161500679 IRF1 JASPAR yes 118388031
chr1 161500660 161500675 PRDM1 JASPAR yes 32567205
chr1 161500660 161500675 PRDM1 JASPAR yes 118388032
chr1 161500689 161500694 SP1 TRANSFAC yes 32567206
chr1 161500689 161500694 SP1 TRANSFAC yes 118388033
chr1 161500725 161500735 SP1 JASPAR yes 32567207
chr1 161500725 161500735 SP1 JASPAR yes 118388034
chr1 161500728 161500733 SP1 TRANSFAC yes 32567208
chr1 161500728 161500733 SP1 TRANSFAC yes 118388035
chr1 161500728 161500734 SP1 TRANSFAC yes 32567209
chr1 161500728 161500734 SP1 TRANSFAC yes 118388036
chr1 161500745 161500755 SP1 JASPAR yes 32567210
chr1 161500745 161500755 SP1 JASPAR yes 118388037
chr1 161500746 161500754 SP1 TRANSFAC yes 32567211
chr1 161500746 161500754 SP1 TRANSFAC yes 118388038
chr1 161500746 161500755 SP1 TRANSFAC yes 32567212
chr1 161500746 161500755 SP1 TRANSFAC yes 118388039
chr1 161500747 161500752 SP1 TRANSFAC yes 32567213
chr1 161500747 161500752 SP1 TRANSFAC yes 118388040
chr1 161500748 161500753 SP1 TRANSFAC yes 32567214
chr1 161500748 161500753 SP1 TRANSFAC yes 118388041
chr1 161500748 161500754 SP1 TRANSFAC yes 32567215
chr1 161500748 161500754 SP1 TRANSFAC yes 118388042
chr1 161500750 161500764 JUN JASPAR yes 32567216
chr1 161500750 161500764 JUN JASPAR yes 118388043
chr1 161500754 161500765 FOS JASPAR yes 32567217
chr1 161500754 161500765 JUND JASPAR yes 32567218
chr1 161500754 161500765 FOS JASPAR yes 118388044
chr1 161500754 161500765 JUND JASPAR yes 118388045
chr1 161500772 161500784 E2F8 JASPAR yes 32567219
chr1 161500772 161500784 E2F8 JASPAR yes 118388046
chr1 161500779 161500783 H1TF2 TRANSFAC yes 32567220
chr1 161500779 161500783 NFE TRANSFAC yes 32567221
chr1 161500779 161500783 SRF TRANSFAC yes 32567222
chr1 161500779 161500783 H1TF2 TRANSFAC yes 118388047
chr1 161500779 161500783 NFE TRANSFAC yes 118388048
chr1 161500779 161500783 SRF TRANSFAC yes 118388049
chr1 161500801 161500804 MYB TRANSFAC yes 32567223
chr1 161500801 161500804 MYB TRANSFAC yes 118388050
chr1 161500809 161500823 FOXF2 JASPAR yes 32567224
chr1 161500809 161500823 FOXF2 JASPAR yes 118388051
chr1 161500810 161500821 HOXC11 JASPAR yes 32567225
chr1 161500810 161500821 HOXC12 JASPAR yes 32567226
chr1 161500810 161500821 HOXD12 JASPAR yes 32567227
chr1 161500810 161500821 HOXC11 JASPAR yes 118388052
chr1 161500810 161500821 HOXC12 JASPAR yes 118388053
chr1 161500810 161500821 HOXD12 JASPAR yes 118388054
chr1 161500811 161500823 FOXC2 JASPAR yes 32567228
chr1 161500811 161500823 FOXC2 JASPAR yes 118388055
chr1 161500814 161500822 FOXG1 JASPAR yes 32567229
chr1 161500814 161500822 FOXO3 JASPAR yes 32567230
chr1 161500814 161500822 FOXG1 JASPAR yes 118388056
chr1 161500814 161500822 FOXO3 JASPAR yes 118388057
chr1 161500823 161500838 HSF1 JASPAR yes 32567231
chr1 161500823 161500838 HSF1 JASPAR yes 118388058
chr1 161500824 161500837 HSF2 JASPAR yes 32567232
chr1 161500824 161500837 HSF2 JASPAR yes 118388059
chr1 161500828 161500843 HSF1 JASPAR yes 32567233
chr1 161500828 161500843 HSF1 JASPAR yes 118388060
chr1 161500829 161500842 HSF2 JASPAR yes 32567234
chr1 161500829 161500842 HSF4 JASPAR yes 32567235
chr1 161500829 161500842 HSF2 JASPAR yes 118388061
chr1 161500829 161500842 HSF4 JASPAR yes 118388062
chr1 161500833 161500848 HSF1 JASPAR yes 32567236
chr1 161500833 161500848 HSF1 JASPAR yes 118388063
chr1 161500834 161500847 HSF1 JASPAR yes 32567237
chr1 161500834 161500847 HSF4 JASPAR yes 32567238
chr1 161500834 161500847 HSF1 JASPAR yes 118388064
chr1 161500834 161500847 HSF4 JASPAR yes 118388065
chr1 161500856 161500862 TCF4 TRANSFAC yes 32567239
chr1 161500856 161500862 TCF4 TRANSFAC yes 118388066
chr1 161500856 161500870 GATA2 JASPAR yes 32567240
chr1 161500856 161500870 GATA2 JASPAR yes 118388067
chr1 161500860 161500868 GATA3 JASPAR yes 32567241
chr1 161500860 161500868 GATA3 JASPAR yes 118388068
chr1 161500864 161500879 MEF2A JASPAR yes 32567242
chr1 161500864 161500879 MEF2A JASPAR yes 118388069
chr1 161500865 161500880 MEF2A JASPAR yes 32567243
chr1 161500865 161500880 MEF2A JASPAR yes 118388070
chr1 161500866 161500878 MEF2A JASPAR yes 32567244
chr1 161500866 161500878 MEF2B JASPAR yes 32567245
chr1 161500866 161500878 MEF2D JASPAR yes 32567246
chr1 161500866 161500878 MEF2A JASPAR yes 118388071
chr1 161500866 161500878 MEF2B JASPAR yes 118388072
chr1 161500866 161500878 MEF2D JASPAR yes 118388073
chr1 161500867 161500877 MEF2A JASPAR yes 32567247
chr1 161500867 161500877 MEF2A JASPAR yes 118388074
chr1 161500868 161500876 FOXL1 JASPAR yes 32567248
chr1 161500868 161500876 FOXL1 JASPAR yes 118388075
SNP sites on vista3658[chr1:161500608-161500899]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 161500636 rs182727863 A T
NFKB1 NFKB2 PEA3 POLR2A REL RELA ZNF263
672264
chr1 161500712 rs114693598 G T
ATF3 POLR2A RPC155 TBP
672265
chr1 161500757 rs372442325 T C
ATF3 FOS JUN JUND POLR2A RPC155 TBP
672266
chr1 161500796 rs72717048 C G
ATF3 BDP1 POLR2A RPC155 TBP
672267
chr1 161500875 rs10919347 T C
ATF3 BDP1 FOXL1 GTF3C2 MEF2A MEF2B MEF2D POLR2A RPC155 TBP
672268
chr1 161500889 rs559671359 T C
ATF3 BDP1 GTF3C2 POLR2A RPC155 TBP
672269
chr1 161500890 rs7541055 C A
ATF3 BDP1 GTF3C2 POLR2A RPC155 TBP
672270
chr1 161500892 rs536719175 A C,G
ATF3 BDP1 GTF3C2 POLR2A RPC155 TBP
672271
chr1 161500894 rs533002185 A C
ATF3 BDP1 GTF3C2 POLR2A RPC155 TBP
672272
chr1 161500895 rs17397332 C G,T
ATF3 BDP1 GTF3C2 POLR2A RPC155 TBP
672273
chr1 161500896 rs115613642 C A,G,T
ATF3 GTF3C2 POLR2A RPC155 TBP
672274
Genes possibly regulated by vista3658[chr1:161500608-161500899]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 161475220 161493803 + FCGR2A ENSG00000143226.9 161475220 0.91 0.99 1490 74612
chr1 161494036 161496681 + HSPA6 ENSG00000173110.6 161494036 0.93 0.91 1491 93428
chr1 161551101 161648444 + FCGR2B ENSG00000072694.14 161551101 0.94 1.0 1493 49798
Expression level of Genes
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miRNAs possibly regulated by vista3658[chr1:161500608-161500899]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results