EnhancerDB
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  3. vista366[chr1:11798209-11798600]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista366[chr1:11798209-11798600]
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Tissue distribution of vista366
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Transcription factor that possibly regulate vista366[chr1:11798209-11798600]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 11798205 11798219 NR2F1 JASPAR yes 26784876
chr1 11798205 11798219 NR2F1 JASPAR yes 118230546
chr1 11798229 11798239 SP1 JASPAR yes 26784877
chr1 11798229 11798239 SP1 JASPAR yes 118230547
chr1 11798232 11798237 SP1 TRANSFAC yes 26784878
chr1 11798232 11798237 SP1 TRANSFAC yes 118230548
chr1 11798234 11798239 TFAP2A TRANSFAC yes 26784879
chr1 11798234 11798239 TFAP2A TRANSFAC yes 118230549
chr1 11798234 11798240 MZF1 JASPAR yes 26784880
chr1 11798234 11798240 MZF1 JASPAR yes 118230550
chr1 11798257 11798278 ZNF263 JASPAR yes 26784881
chr1 11798257 11798278 ZNF263 JASPAR yes 118230551
chr1 11798258 11798269 E2F6 JASPAR yes 26784882
chr1 11798258 11798269 E2F6 JASPAR yes 118230552
chr1 11798262 11798272 ZNF740 JASPAR yes 26784883
chr1 11798262 11798272 ZNF740 JASPAR yes 118230553
chr1 11798265 11798271 MZF1 JASPAR yes 26784884
chr1 11798265 11798271 MZF1 JASPAR yes 118230554
chr1 11798288 11798293 ETS2 TRANSFAC yes 26784885
chr1 11798288 11798293 ETS2 TRANSFAC yes 118230555
chr1 11798294 11798298 LFA1 TRANSFAC yes 26784886
chr1 11798294 11798298 LFA1 TRANSFAC yes 118230556
chr1 11798337 11798341 LFA1 TRANSFAC yes 26784887
chr1 11798337 11798341 LFA1 TRANSFAC yes 118230557
chr1 11798349 11798358 ZEB1 JASPAR yes 26784888
chr1 11798349 11798358 ZEB1 JASPAR yes 118230558
chr1 11798350 11798360 TBR1 JASPAR yes 26784889
chr1 11798350 11798360 TBR1 JASPAR yes 118230559
chr1 11798361 11798371 MYF6 JASPAR yes 26784890
chr1 11798361 11798371 MYF6 JASPAR yes 118230560
chr1 11798364 11798379 TFAP2A JASPAR yes 26784891
chr1 11798364 11798379 TFAP2C JASPAR yes 26784892
chr1 11798364 11798379 TFAP2A JASPAR yes 118230561
chr1 11798364 11798379 TFAP2C JASPAR yes 118230562
chr1 11798366 11798372 NFE2 TRANSFAC yes 26784893
chr1 11798366 11798372 NFE2 TRANSFAC yes 118230563
chr1 11798366 11798378 INSM1 JASPAR yes 26784894
chr1 11798366 11798378 INSM1 JASPAR yes 118230564
chr1 11798367 11798378 TFAP2A JASPAR yes 26784895
chr1 11798367 11798378 TFAP2B JASPAR yes 26784896
chr1 11798367 11798378 TFAP2C JASPAR yes 26784897
chr1 11798367 11798378 TFAP2A JASPAR yes 118230565
chr1 11798367 11798378 TFAP2B JASPAR yes 118230566
chr1 11798367 11798378 TFAP2C JASPAR yes 118230567
chr1 11798367 11798379 TFAP2A JASPAR yes 26784898
chr1 11798367 11798379 TFAP2A JASPAR yes 118230568
chr1 11798368 11798377 TFAP2A JASPAR yes 26784899
chr1 11798368 11798377 TFAP2A JASPAR yes 118230569
chr1 11798378 11798399 REST JASPAR yes 26784900
chr1 11798378 11798399 REST JASPAR yes 118230570
chr1 11798384 11798390 SOX10 JASPAR yes 26784901
chr1 11798384 11798390 SOX10 JASPAR yes 118230571
chr1 11798385 11798396 ESRRA JASPAR yes 26784902
chr1 11798385 11798396 ESRRA JASPAR yes 118230572
chr1 11798389 11798393 LFA1 TRANSFAC yes 26784903
chr1 11798389 11798393 LFA1 TRANSFAC yes 118230573
chr1 11798409 11798413 NFE TRANSFAC yes 26784904
chr1 11798409 11798413 NFE TRANSFAC yes 118230574
chr1 11798431 11798435 H4TF2 TRANSFAC yes 26784905
chr1 11798431 11798435 H4TF2 TRANSFAC yes 118230575
chr1 11798443 11798459 SOX4 JASPAR yes 26784906
chr1 11798443 11798459 SOX4 JASPAR yes 118230576
chr1 11798444 11798459 SOX21 JASPAR yes 26784907
chr1 11798444 11798459 SOX21 JASPAR yes 118230577
chr1 11798444 11798460 SOX4 JASPAR yes 26784908
chr1 11798444 11798460 SOX4 JASPAR yes 118230578
chr1 11798449 11798466 RARA JASPAR yes 26784909
chr1 11798449 11798466 RARA JASPAR yes 118230579
chr1 11798456 11798469 DUXA JASPAR yes 26784910
chr1 11798456 11798469 DUXA JASPAR yes 118230580
chr1 11798457 11798468 DUX4 JASPAR yes 26784911
chr1 11798457 11798468 DUX4 JASPAR yes 118230581
chr1 11798482 11798497 HNF4G JASPAR yes 26784912
chr1 11798482 11798497 HNF4G JASPAR yes 118230582
chr1 11798483 11798498 HNF4A JASPAR yes 26784913
chr1 11798483 11798498 HNF4A JASPAR yes 118230583
chr1 11798489 11798505 ZNF143 JASPAR yes 26784914
chr1 11798489 11798505 ZNF143 JASPAR yes 118230584
chr1 11798500 11798505 ETS2 TRANSFAC yes 26784915
chr1 11798500 11798505 ETS2 TRANSFAC yes 118230585
chr1 11798552 11798556 YY1 TRANSFAC yes 26784916
chr1 11798552 11798556 YY1 TRANSFAC yes 118230586
chr1 11798571 11798581 POU6F2 JASPAR yes 26784917
chr1 11798571 11798581 POU6F2 JASPAR yes 118230587
chr1 11798598 11798615 BCL6B JASPAR yes 26784918
chr1 11798598 11798615 BCL6B JASPAR yes 118230588
SNP sites on vista366[chr1:11798209-11798600]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 11798282 rs59949138 T G no 80649
chr1 11798299 rs138811253 A G no 80650
chr1 11798374 rs575751104 A G
INSM1 TFAP2A TFAP2B TFAP2C
80651
chr1 11798461 rs150827319 T C
DUX4 DUXA RARA
80652
chr1 11798536 rs367563270 A G no 80653
Genes possibly regulated by vista366[chr1:11798209-11798600]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 11708424 11715842 - FBXO2 ENSG00000116661.9 11715842 0.89 1.0 151 17633
chr1 11714432 11723384 + FBXO44 ENSG00000132879.9 11714432 0.72 1.0 152 16223
chr1 11724181 11734411 + FBXO6 ENSG00000116663.6 11724181 0.63 1.0 153 25972
chr1 11734537 11751707 - MAD2L2 ENSG00000116670.10 11751707 0.71 1.0 154 53498
chr1 11751786 11785914 + DRAXIN ENSG00000162490.6 11751786 0.9 1.0 155 53577
chr1 11796141 11814859 + AGTRAP ENSG00000177674.11 11796141 0.65 1.0 156 97932
chr1 11821844 11849642 + C1orf167 ENSG00000215910.3 11821844 0.8 1.0 157 76756
chr1 11845780 11866977 - MTHFR ENSG00000177000.6 11866977 0.65 1.0 158 31623
chr1 11866207 11903201 + CLCN6 ENSG00000011021.17 11866207 0.67 1.0 159 32393
Expression level of Genes
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miRNAs possibly regulated by vista366[chr1:11798209-11798600]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results