EnhancerDB
  1. Home
  2. Enhancers
  3. vista36618[chr20:39661985-39662084]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista36618[chr20:39661985-39662084]
Back to top
Tissue distribution of vista36618
Back to top
Transcription factor that possibly regulate vista36618[chr20:39661985-39662084]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr20 39661971 39661987 NFYA JASPAR yes 51279687
chr20 39661971 39661987 NFYA JASPAR yes 113981149
chr20 39661985 39662000 FOXP1 JASPAR yes 51279693
chr20 39661985 39662000 FOXP1 JASPAR yes 113981150
chr20 39661986 39662001 FOXP1 JASPAR yes 51279694
chr20 39661986 39662001 FOXP1 JASPAR yes 113981151
chr20 39661986 39662007 IRF1 JASPAR yes 51279695
chr20 39661986 39662007 IRF1 JASPAR yes 113981152
chr20 39661987 39662002 FOXP1 JASPAR yes 51279696
chr20 39661987 39662002 FOXP1 JASPAR yes 113981153
chr20 39661987 39662008 IRF1 JASPAR yes 51279697
chr20 39661987 39662008 IRF1 JASPAR yes 113981154
chr20 39661988 39662003 FOXP1 JASPAR yes 51279698
chr20 39661988 39662003 FOXP1 JASPAR yes 113981155
chr20 39661988 39662009 IRF1 JASPAR yes 51279699
chr20 39661988 39662009 IRF1 JASPAR yes 113981156
chr20 39661989 39662004 FOXP1 JASPAR yes 51279700
chr20 39661989 39662004 FOXP1 JASPAR yes 113981157
chr20 39661989 39662010 IRF1 JASPAR yes 51279701
chr20 39661989 39662010 IRF1 JASPAR yes 113981158
chr20 39661990 39662005 FOXP1 JASPAR yes 51279702
chr20 39661990 39662005 FOXP1 JASPAR yes 113981159
chr20 39661990 39662011 IRF1 JASPAR yes 51279703
chr20 39661990 39662011 IRF1 JASPAR yes 113981160
chr20 39661991 39662006 FOXP1 JASPAR yes 51279704
chr20 39661991 39662006 FOXP1 JASPAR yes 113981161
chr20 39661991 39662012 IRF1 JASPAR yes 51279705
chr20 39661991 39662012 IRF1 JASPAR yes 113981162
chr20 39661992 39662007 FOXP1 JASPAR yes 51279706
chr20 39661992 39662007 FOXP1 JASPAR yes 113981163
chr20 39661992 39662013 IRF1 JASPAR yes 51279707
chr20 39661992 39662013 IRF1 JASPAR yes 113981164
chr20 39661993 39662008 FOXP1 JASPAR yes 51279708
chr20 39661993 39662008 FOXP1 JASPAR yes 113981165
chr20 39661994 39662009 FOXP1 JASPAR yes 51279709
chr20 39661994 39662009 FOXP1 JASPAR yes 113981166
chr20 39661996 39662017 IRF1 JASPAR yes 51279710
chr20 39661996 39662017 IRF1 JASPAR yes 113981167
chr20 39662000 39662014 SPI1 JASPAR yes 51279711
chr20 39662000 39662014 SPI1 JASPAR yes 113981168
chr20 39662005 39662010 ETS2 TRANSFAC yes 51279712
chr20 39662005 39662010 ETS2 TRANSFAC yes 113981169
chr20 39662015 39662033 RARA JASPAR yes 51279713
chr20 39662015 39662033 RARA JASPAR yes 113981170
chr20 39662032 39662047 MAFK JASPAR yes 51279714
chr20 39662032 39662047 MAFK JASPAR yes 113981171
chr20 39662034 39662038 NFE TRANSFAC yes 51279715
chr20 39662034 39662038 NFE TRANSFAC yes 113981172
chr20 39662036 39662047 NRL JASPAR yes 51279716
chr20 39662036 39662047 NRL JASPAR yes 113981173
chr20 39662049 39662054 TFAP2A TRANSFAC yes 51279717
chr20 39662049 39662054 TFAP2A TRANSFAC yes 113981174
chr20 39662049 39662055 MZF1 JASPAR yes 51279718
chr20 39662049 39662055 MZF1 JASPAR yes 113981175
chr20 39662075 39662085 POU6F1 JASPAR yes 51279719
chr20 39662075 39662085 POU6F1 JASPAR yes 113981176
chr20 39662078 39662082 YY1 TRANSFAC yes 51279720
chr20 39662078 39662082 YY1 TRANSFAC yes 113981177
SNP sites on vista36618[chr20:39661985-39662084]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista36618[chr20:39661985-39662084]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr20 39657458 39753127 + TOP1 ENSG00000198900.5 39657458 0.7 0.99 18494 95473
Expression level of Genes
Back to top
miRNAs possibly regulated by vista36618[chr20:39661985-39662084]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr20 39797697 39797718 + hsa-miR-6871-3p MIMAT0027643 39766182 0.00010563008344776593 0.839655 0.0 1043
Expression level of miRNAs
Back to top