EnhancerDB
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  3. vista36619[chr20:39762558-39762863]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista36619[chr20:39762558-39762863]
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Tissue distribution of vista36619
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Transcription factor that possibly regulate vista36619[chr20:39762558-39762863]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr20 39762491 39762834 EBF1 UCSC Txn Factor no Conserved 108456803
chr20 39762498 39762906 RUNX3 UCSC Txn Factor no Conserved 108456806
chr20 39762530 39762931 BHLHE40 UCSC Txn Factor no Conserved 108456811
chr20 39762567 39762947 CHD2 UCSC Txn Factor no Conserved 108456817
chr20 39762696 39762940 EGR1 UCSC Txn Factor no Conserved 108456835
chr20 39762562 39762572 MYF6 JASPAR yes 51287312
chr20 39762562 39762572 MYF6 JASPAR yes 113981178
chr20 39762571 39762581 NKX2-3 JASPAR yes 51287313
chr20 39762571 39762581 NKX2-3 JASPAR yes 113981179
chr20 39762572 39762581 NKX3-2 JASPAR yes 51287314
chr20 39762572 39762581 NKX3-2 JASPAR yes 113981180
chr20 39762578 39762582 ESR1 TRANSFAC yes 51287315
chr20 39762578 39762582 ESR1 TRANSFAC yes 113981181
chr20 39762581 39762585 YY1 TRANSFAC yes 51287316
chr20 39762581 39762585 YY1 TRANSFAC yes 113981182
chr20 39762583 39762594 FOXH1 JASPAR yes 51287317
chr20 39762583 39762594 FOXH1 JASPAR yes 113981183
chr20 39762585 39762596 FOXP2 JASPAR yes 51287318
chr20 39762585 39762596 FOXP2 JASPAR yes 113981184
chr20 39762588 39762600 TAL1 JASPAR yes 51287319
chr20 39762588 39762600 TAL1 JASPAR yes 113981185
chr20 39762589 39762601 NHLH1 JASPAR yes 51287320
chr20 39762589 39762601 NHLH1 JASPAR yes 113981186
chr20 39762589 39762602 ZBTB18 JASPAR yes 51287321
chr20 39762589 39762602 ZBTB18 JASPAR yes 113981187
chr20 39762590 39762600 FIGLA JASPAR yes 51287322
chr20 39762590 39762600 MSC JASPAR yes 51287323
chr20 39762590 39762600 MYF6 JASPAR yes 51287324
chr20 39762590 39762600 NHLH1 JASPAR yes 51287325
chr20 39762590 39762600 TFAP4 JASPAR yes 51287326
chr20 39762590 39762600 FIGLA JASPAR yes 113981188
chr20 39762590 39762600 MSC JASPAR yes 113981189
chr20 39762590 39762600 MYF6 JASPAR yes 113981190
chr20 39762590 39762600 NHLH1 JASPAR yes 113981191
chr20 39762590 39762600 TFAP4 JASPAR yes 113981192
chr20 39762605 39762620 RUNX2 JASPAR yes 51287327
chr20 39762605 39762620 RUNX2 JASPAR yes 113981193
chr20 39762614 39762618 H4TF2 TRANSFAC yes 51287328
chr20 39762614 39762618 H4TF2 TRANSFAC yes 113981194
chr20 39762614 39762628 EBF1 JASPAR yes 51287329
chr20 39762614 39762628 EBF1 JASPAR yes 113981195
chr20 39762623 39762627 LFA1 TRANSFAC yes 51287330
chr20 39762623 39762627 LFA1 TRANSFAC yes 113981196
chr20 39762626 39762631 MYC TRANSFAC yes 51287331
chr20 39762626 39762631 MYC TRANSFAC yes 113981197
chr20 39762635 39762648 NFKB2 JASPAR yes 51287332
chr20 39762635 39762648 NFKB2 JASPAR yes 113981198
chr20 39762636 39762646 NFKB1 JASPAR yes 51287333
chr20 39762636 39762646 NFKB1 JASPAR yes 113981199
chr20 39762636 39762647 NFKB1 JASPAR yes 51287334
chr20 39762636 39762647 NFKB1 JASPAR yes 113981200
chr20 39762643 39762649 MZF1 JASPAR yes 51287335
chr20 39762643 39762649 MZF1 JASPAR yes 113981201
chr20 39762655 39762659 LFA1 TRANSFAC yes 51287336
chr20 39762655 39762659 LFA1 TRANSFAC yes 113981202
chr20 39762655 39762670 RFX5 JASPAR yes 51287337
chr20 39762655 39762670 RFX5 JASPAR yes 113981203
chr20 39762661 39762665 LFA1 TRANSFAC yes 51287338
chr20 39762661 39762665 LFA1 TRANSFAC yes 113981204
chr20 39762663 39762679 SOX4 JASPAR yes 51287339
chr20 39762663 39762679 SOX4 JASPAR yes 113981205
chr20 39762674 39762694 TP63 JASPAR yes 51287340
chr20 39762674 39762694 TP63 JASPAR yes 113981206
chr20 39762675 39762693 TP53 JASPAR yes 51287341
chr20 39762675 39762693 TP53 JASPAR yes 113981207
chr20 39762677 39762692 TP53 JASPAR yes 51287342
chr20 39762677 39762692 TP53 JASPAR yes 113981208
chr20 39762682 39762702 TP53 JASPAR yes 51287343
chr20 39762682 39762702 TP53 JASPAR yes 113981209
chr20 39762684 39762688 LFA1 TRANSFAC yes 51287344
chr20 39762684 39762688 LFA1 TRANSFAC yes 113981210
chr20 39762684 39762704 TP63 JASPAR yes 51287345
chr20 39762684 39762704 TP63 JASPAR yes 113981211
chr20 39762685 39762703 TP53 JASPAR yes 51287346
chr20 39762685 39762703 TP63 JASPAR yes 51287347
chr20 39762685 39762703 TP73 JASPAR yes 51287348
chr20 39762685 39762703 TP53 JASPAR yes 113981212
chr20 39762685 39762703 TP63 JASPAR yes 113981213
chr20 39762685 39762703 TP73 JASPAR yes 113981214
chr20 39762686 39762701 TP53 JASPAR yes 51287349
chr20 39762686 39762701 TP53 JASPAR yes 113981215
chr20 39762687 39762702 TP53 JASPAR yes 51287350
chr20 39762687 39762702 TP53 JASPAR yes 113981216
chr20 39762735 39762750 JUND JASPAR yes 51287351
chr20 39762735 39762750 JUND JASPAR yes 113981217
chr20 39762736 39762749 JUN JASPAR yes 51287352
chr20 39762736 39762749 JUN JASPAR yes 113981218
chr20 39762737 39762751 ATF7 JASPAR yes 51287353
chr20 39762737 39762751 BATF3 JASPAR yes 51287354
chr20 39762737 39762751 CREB3 JASPAR yes 51287355
chr20 39762737 39762751 ATF7 JASPAR yes 113981219
chr20 39762737 39762751 BATF3 JASPAR yes 113981220
chr20 39762737 39762751 CREB3 JASPAR yes 113981221
chr20 39762738 39762750 JDP2 JASPAR yes 51287356
chr20 39762738 39762750 JDP2 JASPAR yes 113981222
chr20 39762740 39762745 ATF1 TRANSFAC yes 51287357
chr20 39762740 39762745 ATF1 TRANSFAC yes 113981223
chr20 39762740 39762748 CREB1 JASPAR yes 51287358
chr20 39762740 39762748 CREB1 JASPAR yes 113981224
chr20 39762742 39762747 ATF1 TRANSFAC yes 51287359
chr20 39762742 39762747 ATF1 TRANSFAC yes 113981225
chr20 39762745 39762765 TP63 JASPAR yes 51287360
chr20 39762745 39762765 TP63 JASPAR yes 113981226
chr20 39762748 39762763 TP53 JASPAR yes 51287361
chr20 39762748 39762763 TP53 JASPAR yes 113981227
chr20 39762750 39762770 RREB1 JASPAR yes 51287362
chr20 39762750 39762770 RREB1 JASPAR yes 113981228
chr20 39762791 39762803 NHLH1 JASPAR yes 51287363
chr20 39762791 39762803 NHLH1 JASPAR yes 113981229
chr20 39762792 39762802 NHLH1 JASPAR yes 51287364
chr20 39762792 39762802 NHLH1 JASPAR yes 113981230
chr20 39762809 39762822 EOMES JASPAR yes 51287365
chr20 39762809 39762822 EOMES JASPAR yes 113981231
chr20 39762811 39762821 TBR1 JASPAR yes 51287366
chr20 39762811 39762821 TBR1 JASPAR yes 113981232
chr20 39762811 39762822 TBX20 JASPAR yes 51287367
chr20 39762811 39762822 TBX2 JASPAR yes 51287368
chr20 39762811 39762822 TBX20 JASPAR yes 113981233
chr20 39762811 39762822 TBX2 JASPAR yes 113981234
chr20 39762812 39762822 TBX21 JASPAR yes 51287369
chr20 39762812 39762822 TBX21 JASPAR yes 113981235
chr20 39762813 39762821 MGA JASPAR yes 51287370
chr20 39762813 39762821 TBX15 JASPAR yes 51287371
chr20 39762813 39762821 TBX1 JASPAR yes 51287372
chr20 39762813 39762821 TBX4 JASPAR yes 51287373
chr20 39762813 39762821 TBX5 JASPAR yes 51287374
chr20 39762813 39762821 MGA JASPAR yes 113981236
chr20 39762813 39762821 TBX15 JASPAR yes 113981237
chr20 39762813 39762821 TBX1 JASPAR yes 113981238
chr20 39762813 39762821 TBX4 JASPAR yes 113981239
chr20 39762813 39762821 TBX5 JASPAR yes 113981240
chr20 39762830 39762848 MAFF JASPAR yes 51287375
chr20 39762830 39762848 MAFF JASPAR yes 113981241
chr20 39762832 39762843 NRL JASPAR yes 51287376
chr20 39762832 39762843 NRL JASPAR yes 113981242
chr20 39762832 39762847 MAFK JASPAR yes 51287377
chr20 39762832 39762847 MAFK JASPAR yes 113981243
chr20 39762846 39762857 NFKB1 JASPAR yes 51287378
chr20 39762846 39762857 NFKB1 JASPAR yes 113981244
chr20 39762847 39762852 ETS2 TRANSFAC yes 51287379
chr20 39762847 39762852 ETS2 TRANSFAC yes 113981245
chr20 39762847 39762857 RELA JASPAR yes 51287380
chr20 39762847 39762857 RELA JASPAR yes 113981246
chr20 39762850 39762865 RUNX2 JASPAR yes 51287381
chr20 39762850 39762865 RUNX2 JASPAR yes 113981247
chr20 39762856 39762876 RREB1 JASPAR yes 51287382
chr20 39762856 39762876 RREB1 JASPAR yes 113981248
chr20 39762859 39762874 RUNX2 JASPAR yes 51287383
chr20 39762859 39762874 RUNX2 JASPAR yes 113981249
SNP sites on vista36619[chr20:39762558-39762863]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista36619[chr20:39762558-39762863]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr20 39765600 39811629 + PLCG1 ENSG00000124181.10 39765600 0.76 0.99 18495 97263
Expression level of Genes
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miRNAs possibly regulated by vista36619[chr20:39762558-39762863]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr20 39797697 39797718 + hsa-miR-6871-3p MIMAT0027643 39766182 0.003178272175671771 0.839655 0.0 1043
Expression level of miRNAs
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