EnhancerDB
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  3. vista36623[chr20:39826598-39826945]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista36623[chr20:39826598-39826945]
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Tissue distribution of vista36623
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Transcription factor that possibly regulate vista36623[chr20:39826598-39826945]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr20 39826604 39826618 FOXF2 JASPAR yes 113981416
chr20 39826606 39826610 YY1 TRANSFAC yes 113981417
chr20 39826625 39826635 HMBOX1 JASPAR yes 113981418
chr20 39826626 39826634 LBX1 JASPAR yes 113981419
chr20 39826627 39826630 MYB TRANSFAC yes 113981420
chr20 39826631 39826652 IRF1 JASPAR yes 113981421
chr20 39826633 39826654 IRF1 JASPAR yes 113981422
chr20 39826634 39826655 IRF1 JASPAR yes 113981423
chr20 39826635 39826656 IRF1 JASPAR yes 113981424
chr20 39826636 39826651 FOXP1 JASPAR yes 113981425
chr20 39826636 39826657 IRF1 JASPAR yes 113981426
chr20 39826637 39826658 IRF1 JASPAR yes 113981427
chr20 39826638 39826653 FOXP1 JASPAR yes 113981428
chr20 39826638 39826659 IRF1 JASPAR yes 113981429
chr20 39826639 39826654 FOXP1 JASPAR yes 113981430
chr20 39826639 39826660 IRF1 JASPAR yes 113981431
chr20 39826640 39826655 FOXP1 JASPAR yes 113981432
chr20 39826640 39826661 IRF1 JASPAR yes 113981433
chr20 39826641 39826656 FOXP1 JASPAR yes 113981434
chr20 39826641 39826662 IRF1 JASPAR yes 113981435
chr20 39826642 39826657 FOXP1 JASPAR yes 113981436
chr20 39826643 39826658 FOXP1 JASPAR yes 113981437
chr20 39826644 39826659 FOXP1 JASPAR yes 113981438
chr20 39826645 39826660 FOXP1 JASPAR yes 113981439
chr20 39826646 39826661 FOXP1 JASPAR yes 113981440
chr20 39826647 39826662 FOXP1 JASPAR yes 113981441
chr20 39826648 39826663 FOXP1 JASPAR yes 113981442
chr20 39826676 39826682 NFE2 TRANSFAC yes 113981443
chr20 39826776 39826786 GSC2 JASPAR yes 113981444
chr20 39826776 39826786 GSC JASPAR yes 113981445
chr20 39826777 39826785 OTX1 JASPAR yes 113981446
chr20 39826777 39826786 PITX3 JASPAR yes 113981447
chr20 39826784 39826803 REST JASPAR yes 113981448
chr20 39826810 39826814 YY1 TRANSFAC yes 113981449
chr20 39826831 39826843 YY1 JASPAR yes 113981450
chr20 39826860 39826873 NR2F1 JASPAR yes 113981451
chr20 39826864 39826881 RXRA JASPAR yes 113981452
chr20 39826874 39826880 ZNF354C JASPAR yes 113981453
chr20 39826879 39826893 PLAG1 JASPAR yes 113981454
chr20 39826900 39826919 PITX2 TRANSFAC yes 113981455
chr20 39826906 39826919 ZBTB18 JASPAR yes 113981456
chr20 39826907 39826919 PKNOX1 JASPAR yes 113981457
chr20 39826907 39826919 TGIF1 JASPAR yes 113981458
chr20 39826908 39826917 SNAI2 JASPAR yes 113981459
chr20 39826908 39826918 FIGLA JASPAR yes 113981460
chr20 39826908 39826918 ID4 JASPAR yes 113981461
chr20 39826908 39826918 TCF3 JASPAR yes 113981462
chr20 39826908 39826918 TCF4 JASPAR yes 113981463
chr20 39826910 39826919 ZEB1 JASPAR yes 113981464
chr20 39826910 39826920 TBX21 JASPAR yes 113981465
chr20 39826911 39826919 MGA JASPAR yes 113981466
chr20 39826911 39826919 TBX15 JASPAR yes 113981467
chr20 39826911 39826919 TBX1 JASPAR yes 113981468
chr20 39826911 39826919 TBX4 JASPAR yes 113981469
chr20 39826911 39826919 TBX5 JASPAR yes 113981470
chr20 39826911 39826921 TBR1 JASPAR yes 113981471
chr20 39826911 39826924 SMAD2 JASPAR yes 113981472
chr20 39826924 39826934 ID4 JASPAR yes 113981473
chr20 39826924 39826934 TCF4 JASPAR yes 113981474
chr20 39826926 39826931 USF2 TRANSFAC yes 113981475
chr20 39826929 39826943 RORA JASPAR yes 113981476
chr20 39826935 39826939 YY1 TRANSFAC yes 113981477
SNP sites on vista36623[chr20:39826598-39826945]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista36623[chr20:39826598-39826945]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr20 39765600 39811629 + PLCG1 ENSG00000124181.10 39765600 0.76 0.99 18495 39002
Expression level of Genes
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miRNAs possibly regulated by vista36623[chr20:39826598-39826945]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results