EnhancerDB
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  3. vista36626[chr20:39938508-39938643]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista36626[chr20:39938508-39938643]
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Tissue distribution of vista36626
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Transcription factor that possibly regulate vista36626[chr20:39938508-39938643]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr20 39938522 39938526 YY1 TRANSFAC yes 51298069
chr20 39938522 39938526 YY1 TRANSFAC yes 113981524
chr20 39938548 39938554 HiNF-A TRANSFAC yes 51298070
chr20 39938548 39938554 HiNF-A TRANSFAC yes 113981525
chr20 39938551 39938563 TEAD1 JASPAR yes 51298071
chr20 39938551 39938563 TEAD1 JASPAR yes 113981526
chr20 39938560 39938564 NFE TRANSFAC yes 51298072
chr20 39938560 39938564 NFE TRANSFAC yes 113981527
chr20 39938565 39938574 HIC2 JASPAR yes 51298073
chr20 39938565 39938574 HIC2 JASPAR yes 113981528
chr20 39938569 39938581 HNF1B JASPAR yes 51298074
chr20 39938569 39938581 HNF1B JASPAR yes 113981529
chr20 39938570 39938578 HOXA5 JASPAR yes 51298075
chr20 39938570 39938578 HOXA5 JASPAR yes 113981530
chr20 39938571 39938581 EMX1 JASPAR yes 51298076
chr20 39938571 39938581 EMX2 JASPAR yes 51298077
chr20 39938571 39938581 GBX2 JASPAR yes 51298078
chr20 39938571 39938581 GSX1 JASPAR yes 51298079
chr20 39938571 39938581 GSX2 JASPAR yes 51298080
chr20 39938571 39938581 HOXB2 JASPAR yes 51298081
chr20 39938571 39938581 HOXB3 JASPAR yes 51298082
chr20 39938571 39938581 LHX6 JASPAR yes 51298083
chr20 39938571 39938581 MEOX1 JASPAR yes 51298084
chr20 39938571 39938581 MEOX2 JASPAR yes 51298085
chr20 39938571 39938581 MNX1 JASPAR yes 51298086
chr20 39938571 39938581 POU6F1 JASPAR yes 51298087
chr20 39938571 39938581 RAX JASPAR yes 51298088
chr20 39938571 39938581 EMX1 JASPAR yes 113981531
chr20 39938571 39938581 EMX2 JASPAR yes 113981532
chr20 39938571 39938581 GBX2 JASPAR yes 113981533
chr20 39938571 39938581 GSX1 JASPAR yes 113981534
chr20 39938571 39938581 GSX2 JASPAR yes 113981535
chr20 39938571 39938581 HOXB2 JASPAR yes 113981536
chr20 39938571 39938581 HOXB3 JASPAR yes 113981537
chr20 39938571 39938581 LHX6 JASPAR yes 113981538
chr20 39938571 39938581 MEOX1 JASPAR yes 113981539
chr20 39938571 39938581 MEOX2 JASPAR yes 113981540
chr20 39938571 39938581 MNX1 JASPAR yes 113981541
chr20 39938571 39938581 POU6F1 JASPAR yes 113981542
chr20 39938571 39938581 RAX JASPAR yes 113981543
chr20 39938572 39938580 LMX1A JASPAR yes 51298089
chr20 39938572 39938580 LMX1B JASPAR yes 51298090
chr20 39938572 39938580 NKX6-1 JASPAR yes 51298091
chr20 39938572 39938580 NKX6-2 JASPAR yes 51298092
chr20 39938572 39938580 PDX1 JASPAR yes 51298093
chr20 39938572 39938580 VAX1 JASPAR yes 51298094
chr20 39938572 39938580 VAX2 JASPAR yes 51298095
chr20 39938572 39938580 VSX1 JASPAR yes 51298096
chr20 39938572 39938580 LMX1A JASPAR yes 113981544
chr20 39938572 39938580 LMX1B JASPAR yes 113981545
chr20 39938572 39938580 NKX6-1 JASPAR yes 113981546
chr20 39938572 39938580 NKX6-2 JASPAR yes 113981547
chr20 39938572 39938580 PDX1 JASPAR yes 113981548
chr20 39938572 39938580 VAX1 JASPAR yes 113981549
chr20 39938572 39938580 VAX2 JASPAR yes 113981550
chr20 39938572 39938580 VSX1 JASPAR yes 113981551
chr20 39938573 39938583 PAX3 JASPAR yes 51298097
chr20 39938573 39938583 PAX7 JASPAR yes 51298098
chr20 39938573 39938583 PAX3 JASPAR yes 113981552
chr20 39938573 39938583 PAX7 JASPAR yes 113981553
chr20 39938575 39938585 GBX2 JASPAR yes 51298099
chr20 39938575 39938585 GSX2 JASPAR yes 51298100
chr20 39938575 39938585 MNX1 JASPAR yes 51298101
chr20 39938575 39938585 RAX JASPAR yes 51298102
chr20 39938575 39938585 GBX2 JASPAR yes 113981554
chr20 39938575 39938585 GSX2 JASPAR yes 113981555
chr20 39938575 39938585 MNX1 JASPAR yes 113981556
chr20 39938575 39938585 RAX JASPAR yes 113981557
chr20 39938576 39938584 BARX1 JASPAR yes 51298103
chr20 39938576 39938584 BSX JASPAR yes 51298104
chr20 39938576 39938584 ISL2 JASPAR yes 51298105
chr20 39938576 39938584 LMX1B JASPAR yes 51298106
chr20 39938576 39938584 MSX1 JASPAR yes 51298107
chr20 39938576 39938584 MSX2 JASPAR yes 51298108
chr20 39938576 39938584 BARX1 JASPAR yes 113981558
chr20 39938576 39938584 BSX JASPAR yes 113981559
chr20 39938576 39938584 ISL2 JASPAR yes 113981560
chr20 39938576 39938584 LMX1B JASPAR yes 113981561
chr20 39938576 39938584 MSX1 JASPAR yes 113981562
chr20 39938576 39938584 MSX2 JASPAR yes 113981563
chr20 39938576 39938585 VENTX JASPAR yes 51298109
chr20 39938576 39938585 VENTX JASPAR yes 113981564
chr20 39938597 39938618 ZNF263 JASPAR yes 51298110
chr20 39938597 39938618 ZNF263 JASPAR yes 113981565
chr20 39938640 39938650 SREBF1 JASPAR yes 51298111
chr20 39938640 39938650 SREBF2 JASPAR yes 51298112
chr20 39938640 39938650 SREBF1 JASPAR yes 113981566
chr20 39938640 39938650 SREBF2 JASPAR yes 113981567
SNP sites on vista36626[chr20:39938508-39938643]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista36626[chr20:39938508-39938643]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr20 39807088 39946312 - ZHX3 ENSG00000174306.17 39946312 0.81 0.99 18496 92331
chr20 39969560 39989222 + LPIN3 ENSG00000132793.7 39969560 0.77 1.0 18497 69083
chr20 39988606 39995467 - EMILIN3 ENSG00000183798.4 39995467 0.92 1.0 18498 43176
Expression level of Genes
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miRNAs possibly regulated by vista36626[chr20:39938508-39938643]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results