EnhancerDB
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  3. vista37[chr1:1295535-1296332]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista37[chr1:1295535-1296332]
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Tissue distribution of vista37
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Transcription factor that possibly regulate vista37[chr1:1295535-1296332]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 1295562 1295571 THAP1 JASPAR yes 26190455
chr1 1295562 1295571 THAP1 JASPAR yes 118214866
chr1 1295565 1295569 LFA1 TRANSFAC yes 26190456
chr1 1295565 1295569 LFA1 TRANSFAC yes 118214867
chr1 1295570 1295584 TLX1 JASPAR yes 26190457
chr1 1295570 1295584 TLX1 JASPAR yes 118214868
chr1 1295614 1295629 TFAP2A JASPAR yes 26190458
chr1 1295614 1295629 TFAP2A JASPAR yes 118214869
chr1 1295624 1295628 NFE TRANSFAC yes 26190459
chr1 1295624 1295628 NFE TRANSFAC yes 118214870
chr1 1295639 1295652 NR2F1 JASPAR yes 26190460
chr1 1295639 1295652 NR2F1 JASPAR yes 118214871
chr1 1295653 1295672 CTCF JASPAR yes 26190461
chr1 1295653 1295672 CTCF JASPAR yes 118214872
chr1 1295655 1295674 CTCF JASPAR yes 26190462
chr1 1295655 1295674 CTCF JASPAR yes 118214873
chr1 1295659 1295664 USF2 TRANSFAC yes 26190463
chr1 1295659 1295664 USF2 TRANSFAC yes 118214874
chr1 1295659 1295671 TFAP2A JASPAR yes 26190464
chr1 1295659 1295671 TFAP2B JASPAR yes 26190465
chr1 1295659 1295671 TFAP2A JASPAR yes 118214875
chr1 1295659 1295671 TFAP2B JASPAR yes 118214876
chr1 1295662 1295682 PPARG JASPAR yes 26190466
chr1 1295662 1295682 PPARG JASPAR yes 118214877
chr1 1295666 1295670 LFA1 TRANSFAC yes 26190467
chr1 1295666 1295670 LFA1 TRANSFAC yes 118214878
chr1 1295673 1295688 ZIC4 JASPAR yes 26190468
chr1 1295673 1295688 ZIC4 JASPAR yes 118214879
chr1 1295673 1295690 RARA JASPAR yes 26190469
chr1 1295673 1295690 RARA JASPAR yes 118214880
chr1 1295675 1295689 EBF1 JASPAR yes 26190470
chr1 1295675 1295689 EBF1 JASPAR yes 118214881
chr1 1295676 1295687 EBF1 JASPAR yes 26190471
chr1 1295676 1295687 EBF1 JASPAR yes 118214882
chr1 1295677 1295688 EBF1 JASPAR yes 26190472
chr1 1295677 1295688 EBF1 JASPAR yes 118214883
chr1 1295683 1295688 SP1 TRANSFAC yes 26190473
chr1 1295683 1295688 SP1 TRANSFAC yes 118214884
chr1 1295686 1295695 TFAP2A JASPAR yes 26190474
chr1 1295686 1295695 TFAP2A JASPAR yes 118214885
chr1 1295691 1295695 LFA1 TRANSFAC yes 26190475
chr1 1295691 1295695 LFA1 TRANSFAC yes 118214886
chr1 1295695 1295700 ETS2 TRANSFAC yes 26190476
chr1 1295695 1295700 ETS2 TRANSFAC yes 118214887
chr1 1295707 1295722 JUND JASPAR yes 26190477
chr1 1295707 1295722 JUND JASPAR yes 118214888
chr1 1295708 1295721 JUN JASPAR yes 26190478
chr1 1295708 1295721 JUN JASPAR yes 118214889
chr1 1295716 1295722 YY1 JASPAR yes 26190479
chr1 1295716 1295722 YY1 JASPAR yes 118214890
chr1 1295723 1295740 RARA JASPAR yes 26190480
chr1 1295723 1295740 RARA JASPAR yes 118214891
chr1 1295725 1295746 ZNF263 JASPAR yes 26190481
chr1 1295725 1295746 ZNF263 JASPAR yes 118214892
chr1 1295743 1295747 NFE TRANSFAC yes 26190482
chr1 1295743 1295747 NFE TRANSFAC yes 118214893
chr1 1295764 1295779 RUNX2 JASPAR yes 26190483
chr1 1295764 1295779 RUNX2 JASPAR yes 118214894
chr1 1295796 1295814 ESR2 JASPAR yes 26190484
chr1 1295796 1295814 ESR2 JASPAR yes 118214895
chr1 1295798 1295813 ESR2 JASPAR yes 26190485
chr1 1295798 1295813 ESR2 JASPAR yes 118214896
chr1 1295799 1295803 ESR1 TRANSFAC yes 26190486
chr1 1295799 1295803 ESR1 TRANSFAC yes 118214897
chr1 1295799 1295810 USF1 JASPAR yes 26190487
chr1 1295799 1295810 USF2 JASPAR yes 26190488
chr1 1295799 1295810 USF1 JASPAR yes 118214898
chr1 1295799 1295810 USF2 JASPAR yes 118214899
chr1 1295800 1295807 USF2 TRANSFAC yes 26190489
chr1 1295800 1295807 USF2 TRANSFAC yes 118214900
chr1 1295802 1295807 USF2 TRANSFAC yes 26190490
chr1 1295802 1295807 USF2 TRANSFAC yes 118214901
chr1 1295820 1295833 NR2F1 JASPAR yes 26190491
chr1 1295820 1295833 NR2F1 JASPAR yes 118214902
chr1 1295842 1295854 TEAD1 JASPAR yes 26190492
chr1 1295842 1295854 TEAD1 JASPAR yes 118214903
chr1 1295844 1295852 EHF JASPAR yes 26190493
chr1 1295844 1295852 EHF JASPAR yes 118214904
chr1 1295873 1295888 ZIC3 JASPAR yes 26190494
chr1 1295873 1295888 ZIC4 JASPAR yes 26190495
chr1 1295873 1295888 ZIC3 JASPAR yes 118214905
chr1 1295873 1295888 ZIC4 JASPAR yes 118214906
chr1 1295874 1295888 GLIS2 JASPAR yes 26190496
chr1 1295874 1295888 GLIS3 JASPAR yes 26190497
chr1 1295874 1295888 GLIS2 JASPAR yes 118214907
chr1 1295874 1295888 GLIS3 JASPAR yes 118214908
chr1 1295880 1295890 SP1 JASPAR yes 26190498
chr1 1295880 1295890 SP1 JASPAR yes 118214909
chr1 1295934 1295938 YY1 TRANSFAC yes 26190499
chr1 1295934 1295938 YY1 TRANSFAC yes 118214910
chr1 1295949 1295954 ETS2 TRANSFAC yes 26190500
chr1 1295949 1295954 ETS2 TRANSFAC yes 118214911
chr1 1295968 1295974 SOX10 JASPAR yes 26190501
chr1 1295968 1295974 SOX10 JASPAR yes 118214912
chr1 1295977 1295990 JUN JASPAR yes 26190502
chr1 1295977 1295990 JUN JASPAR yes 118214913
chr1 1296000 1296012 INSM1 JASPAR yes 26190503
chr1 1296000 1296012 TFAP2A JASPAR yes 26190504
chr1 1296000 1296012 TFAP2B JASPAR yes 26190505
chr1 1296000 1296012 TFAP2C JASPAR yes 26190506
chr1 1296000 1296012 INSM1 JASPAR yes 118214914
chr1 1296000 1296012 TFAP2A JASPAR yes 118214915
chr1 1296000 1296012 TFAP2B JASPAR yes 118214916
chr1 1296000 1296012 TFAP2C JASPAR yes 118214917
chr1 1296044 1296055 EBF1 JASPAR yes 26190507
chr1 1296044 1296055 EBF1 JASPAR yes 118214918
chr1 1296045 1296065 RREB1 JASPAR yes 26190508
chr1 1296045 1296065 RREB1 JASPAR yes 118214919
chr1 1296068 1296081 NR2F1 JASPAR yes 118214920
chr1 1296069 1296087 ESR2 JASPAR yes 118214921
chr1 1296071 1296086 ESR2 JASPAR yes 118214922
chr1 1296072 1296076 ESR1 TRANSFAC yes 118214923
chr1 1296132 1296142 RELA JASPAR yes 118214924
chr1 1296132 1296142 REL JASPAR yes 118214925
chr1 1296134 1296144 TEAD4 JASPAR yes 118214926
chr1 1296134 1296146 TEAD1 JASPAR yes 118214927
chr1 1296135 1296143 TEAD3 JASPAR yes 118214928
chr1 1296137 1296148 STAT3 JASPAR yes 118214929
chr1 1296159 1296164 ETS2 TRANSFAC yes 118214930
chr1 1296159 1296174 STAT2 JASPAR yes 118214931
chr1 1296166 1296181 RUNX2 JASPAR yes 118214932
chr1 1296167 1296176 RUNX2 JASPAR yes 118214933
chr1 1296167 1296177 RUNX3 JASPAR yes 118214934
chr1 1296233 1296243 MAX JASPAR yes 118214935
chr1 1296251 1296257 SOX10 JASPAR yes 118214936
chr1 1296257 1296267 MAX JASPAR yes 118214937
chr1 1296299 1296309 MAX JASPAR yes 118214938
SNP sites on vista37[chr1:1295535-1296332]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 1295607 rs570445716 G A no 6021
chr1 1295682 rs35705386 A G
EBF1 PPARG RARA ZIC4
6022
chr1 1295814 rs113843160 C G
ESR2
6023
chr1 1295870 rs145745736 C T no 6024
chr1 1295882 rs564906656 G GGGGGCGGGC
GLIS2 GLIS3 SP1 ZIC3 ZIC4
6025
chr1 1295882 rs76580958 G GGGGGCGGGC
GLIS2 GLIS3 SP1 ZIC3 ZIC4
6026
chr1 1295887 rs533071465 T TGGGGGGC
GLIS2 GLIS3 SP1 ZIC3 ZIC4
6027
chr1 1295887 rs75605518 T TGGGGGGC
GLIS2 GLIS3 SP1 ZIC3 ZIC4
6028
chr1 1295982 rs145327736 C T
JUN
6029
chr1 1296004 rs544145270 C T
INSM1 TFAP2A TFAP2B TFAP2C
6030
chr1 1296118 rs186822424 C T no 6031
chr1 1296153 rs2765027 T G no 6032
chr1 1296255 rs370716566 A C
SOX10
6033
chr1 1296255 rs373395640 AAGACACACATGG A
SOX10
6034
chr1 1296255 rs560295906 AAGACACACATGG A
SOX10
6035
chr1 1296281 rs201441330 TAC T no 6036
chr1 1296281 rs527491790 TACAC T no 6037
chr1 1296281 rs549102424 TAC T no 6038
chr1 1296303 rs191286731 C T
MAX
6039
chr1 1296311 rs370671944 GAC G no 6040
chr1 1296311 rs373581096 GAC G no 6041
chr1 1296315 rs184998052 C G no 6042
Genes possibly regulated by vista37[chr1:1295535-1296332]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 1189289 1209265 - UBE2J2 ENSG00000160087.16 1209265 0.6 0.99 22 13730
chr1 1215816 1227409 + SCNN1D ENSG00000162572.15 1215816 0.8 1.0 23 20281
chr1 1227756 1244989 - ACAP3 ENSG00000131584.14 1244989 0.7 1.0 24 49454
chr1 1243947 1247057 + PUSL1 ENSG00000169972.7 1243947 0.52 1.0 25 48412
chr1 1246965 1260071 - CPSF3L ENSG00000127054.14 1260071 0.62 1.0 26 64536
chr1 1260136 1264277 + GLTPD1 ENSG00000224051.2 1260136 0.68 0.99 27 64601
chr1 1266694 1270686 + TAS1R3 ENSG00000169962.4 1266694 0.93 0.99 28 71159
chr1 1270656 1284730 - DVL1 ENSG00000107404.13 1284730 0.62 1.0 29 89195
chr1 1288069 1297157 - MXRA8 ENSG00000162576.12 1297157 0.75 1.0 30 99175
chr1 1309110 1310875 - AURKAIP1 ENSG00000175756.9 1310875 0.75 0.99 31 85457
chr1 1321091 1334708 - CCNL2 ENSG00000221978.7 1334708 0.62 1.0 32 61624
chr1 1334902 1337426 + RP4-758J18.2 ENSG00000224870.3 1334902 0.53 1.0 33 61430
chr1 1337288 1342693 - MRPL20 ENSG00000242485.1 1342693 0.77 0.99 34 53639
chr1 1353800 1357149 - ANKRD65 ENSG00000235098.4 1357149 0.81 1.0 35 39183
chr1 1361508 1363167 + TMEM88B ENSG00000205116.3 1361508 0.9 0.99 36 34824
chr1 1370241 1378262 + VWA1 ENSG00000179403.10 1370241 0.76 1.0 37 26091
chr1 1385069 1405538 + ATAD3C ENSG00000215915.5 1385069 0.83 1.0 38 11263
Expression level of Genes
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miRNAs possibly regulated by vista37[chr1:1295535-1296332]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results