EnhancerDB
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  3. vista37204[chr20:52701459-52701889]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista37204[chr20:52701459-52701889]
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Tissue distribution of vista37204
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Transcription factor that possibly regulate vista37204[chr20:52701459-52701889]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr20 52701470 52701875 TCF12 UCSC Txn Factor no Conserved 108474299
chr20 52701477 52701898 EP300 UCSC Txn Factor no Conserved 108474301
chr20 52701508 52701784 FOXA1 UCSC Txn Factor no Conserved 108474303
chr20 52701548 52701802 FOSL2 UCSC Txn Factor no Conserved 108474308
chr20 52701584 52701767 GATA3 UCSC Txn Factor no Conserved 108474310
chr20 52701490 52701494 TEAD2 TRANSFAC yes 52149315
chr20 52701490 52701494 TEAD2 TRANSFAC yes 114010938
chr20 52701501 52701505 YY1 TRANSFAC yes 52149316
chr20 52701501 52701505 YY1 TRANSFAC yes 114010939
chr20 52701519 52701534 JUND JASPAR yes 52149317
chr20 52701519 52701534 JUND JASPAR yes 114010940
chr20 52701539 52701553 SPI1 JASPAR yes 52149318
chr20 52701539 52701553 SPI1 JASPAR yes 114010941
chr20 52701587 52701600 POU2F2 JASPAR yes 52149319
chr20 52701587 52701600 POU2F2 JASPAR yes 114010942
chr20 52701590 52701604 IRF7 JASPAR yes 52149320
chr20 52701590 52701604 IRF7 JASPAR yes 114010943
chr20 52701595 52701599 YY1 TRANSFAC yes 52149321
chr20 52701595 52701599 YY1 TRANSFAC yes 114010944
chr20 52701597 52701612 FOXA1 JASPAR yes 52149322
chr20 52701597 52701612 FOXA1 JASPAR yes 114010945
chr20 52701598 52701613 FOXP1 JASPAR yes 52149323
chr20 52701598 52701613 FOXP1 JASPAR yes 114010946
chr20 52701599 52701611 FOXC2 JASPAR yes 52149324
chr20 52701599 52701611 FOXC2 JASPAR yes 114010947
chr20 52701601 52701612 FOXA1 JASPAR yes 52149325
chr20 52701601 52701612 FOXA1 JASPAR yes 114010948
chr20 52701607 52701620 ZBTB18 JASPAR yes 52149326
chr20 52701607 52701620 ZBTB18 JASPAR yes 114010949
chr20 52701622 52701636 RORA JASPAR yes 52149327
chr20 52701622 52701636 RORA JASPAR yes 114010950
chr20 52701630 52701634 ESR1 TRANSFAC yes 52149328
chr20 52701630 52701634 ESR1 TRANSFAC yes 114010951
chr20 52701687 52701696 VENTX JASPAR yes 52149329
chr20 52701687 52701696 VENTX JASPAR yes 114010952
chr20 52701687 52701697 EN2 JASPAR yes 52149330
chr20 52701687 52701697 ESX1 JASPAR yes 52149331
chr20 52701687 52701697 GBX1 JASPAR yes 52149332
chr20 52701687 52701697 GBX2 JASPAR yes 52149333
chr20 52701687 52701697 GSX2 JASPAR yes 52149334
chr20 52701687 52701697 HESX1 JASPAR yes 52149335
chr20 52701687 52701697 HOXB2 JASPAR yes 52149336
chr20 52701687 52701697 HOXB3 JASPAR yes 52149337
chr20 52701687 52701697 MEOX2 JASPAR yes 52149338
chr20 52701687 52701697 MNX1 JASPAR yes 52149339
chr20 52701687 52701697 RAX JASPAR yes 52149340
chr20 52701687 52701697 EN2 JASPAR yes 114010953
chr20 52701687 52701697 ESX1 JASPAR yes 114010954
chr20 52701687 52701697 GBX1 JASPAR yes 114010955
chr20 52701687 52701697 GBX2 JASPAR yes 114010956
chr20 52701687 52701697 GSX2 JASPAR yes 114010957
chr20 52701687 52701697 HESX1 JASPAR yes 114010958
chr20 52701687 52701697 HOXB2 JASPAR yes 114010959
chr20 52701687 52701697 HOXB3 JASPAR yes 114010960
chr20 52701687 52701697 MEOX2 JASPAR yes 114010961
chr20 52701687 52701697 MNX1 JASPAR yes 114010962
chr20 52701687 52701697 RAX JASPAR yes 114010963
chr20 52701688 52701696 BARX1 JASPAR yes 52149341
chr20 52701688 52701696 BSX JASPAR yes 52149342
chr20 52701688 52701696 ISL2 JASPAR yes 52149343
chr20 52701688 52701696 LMX1B JASPAR yes 52149344
chr20 52701688 52701696 MSX1 JASPAR yes 52149345
chr20 52701688 52701696 MSX2 JASPAR yes 52149346
chr20 52701688 52701696 BARX1 JASPAR yes 114010964
chr20 52701688 52701696 BSX JASPAR yes 114010965
chr20 52701688 52701696 ISL2 JASPAR yes 114010966
chr20 52701688 52701696 LMX1B JASPAR yes 114010967
chr20 52701688 52701696 MSX1 JASPAR yes 114010968
chr20 52701688 52701696 MSX2 JASPAR yes 114010969
chr20 52701693 52701696 MYB TRANSFAC yes 52149347
chr20 52701693 52701696 MYB TRANSFAC yes 114010970
chr20 52701725 52701740 SCRT1 JASPAR yes 52149348
chr20 52701725 52701740 SCRT1 JASPAR yes 114010971
chr20 52701764 52701768 YY1 TRANSFAC yes 52149349
chr20 52701764 52701768 YY1 TRANSFAC yes 114010972
chr20 52701787 52701796 THAP1 JASPAR yes 52149350
chr20 52701787 52701796 THAP1 JASPAR yes 114010973
chr20 52701812 52701816 YY1 TRANSFAC yes 52149351
chr20 52701812 52701816 YY1 TRANSFAC yes 114010974
chr20 52701816 52701831 TFAP2C JASPAR yes 52149352
chr20 52701816 52701831 TFAP2C JASPAR yes 114010975
chr20 52701848 52701863 NR2C2 JASPAR yes 52149353
chr20 52701848 52701863 NR2C2 JASPAR yes 114010976
chr20 52701849 52701863 NR2F1 JASPAR yes 52149354
chr20 52701849 52701863 RXRB JASPAR yes 52149355
chr20 52701849 52701863 RXRG JASPAR yes 52149356
chr20 52701849 52701863 NR2F1 JASPAR yes 114010977
chr20 52701849 52701863 RXRB JASPAR yes 114010978
chr20 52701849 52701863 RXRG JASPAR yes 114010979
chr20 52701862 52701878 SOX4 JASPAR yes 52149357
chr20 52701862 52701878 SOX4 JASPAR yes 114010980
SNP sites on vista37204[chr20:52701459-52701889]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista37204[chr20:52701459-52701889]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr20 52553316 52687304 - BCAS1 ENSG00000064787.8 52687304 0.92 0.95 18619 85845
chr20 52769988 52790512 - CYP24A1 ENSG00000019186.5 52790512 0.96 0.98 18620 11377
Expression level of Genes
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miRNAs possibly regulated by vista37204[chr20:52701459-52701889]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr20 52684957 52684978 - hsa-miR-4756-3p MIMAT0019900 52687085 0.007562415829275873 0.0 0.0 1050
Expression level of miRNAs
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