EnhancerDB
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  3. vista37207[chr20:52730221-52730319]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista37207[chr20:52730221-52730319]
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Tissue distribution of vista37207
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Transcription factor that possibly regulate vista37207[chr20:52730221-52730319]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr20 52730227 52730238 STAT1 JASPAR yes 52153630
chr20 52730227 52730238 STAT1 JASPAR yes 114011034
chr20 52730231 52730242 NFKB1 JASPAR yes 52153631
chr20 52730231 52730242 NFKB1 JASPAR yes 114011035
chr20 52730232 52730237 ETS2 TRANSFAC yes 52153632
chr20 52730232 52730237 ETS2 TRANSFAC yes 114011036
chr20 52730261 52730267 SP1 TRANSFAC yes 52153633
chr20 52730261 52730267 SP1 TRANSFAC yes 114011037
chr20 52730262 52730267 SP1 TRANSFAC yes 52153634
chr20 52730262 52730267 SP1 TRANSFAC yes 114011038
chr20 52730263 52730268 SP1 TRANSFAC yes 52153635
chr20 52730263 52730268 SP1 TRANSFAC yes 114011039
chr20 52730279 52730294 TFAP2A JASPAR yes 52153636
chr20 52730279 52730294 TFAP2A JASPAR yes 114011040
chr20 52730289 52730300 USF1 JASPAR yes 52153637
chr20 52730289 52730300 USF1 JASPAR yes 114011041
chr20 52730290 52730300 TFEB JASPAR yes 52153638
chr20 52730290 52730300 TFEC JASPAR yes 52153639
chr20 52730290 52730300 TFEB JASPAR yes 114011042
chr20 52730290 52730300 TFEC JASPAR yes 114011043
chr20 52730295 52730313 RARA JASPAR yes 52153640
chr20 52730295 52730313 RARA JASPAR yes 114011044
chr20 52730305 52730309 ESR1 TRANSFAC yes 52153641
chr20 52730305 52730309 ESR1 TRANSFAC yes 114011045
chr20 52730305 52730316 USF1 JASPAR yes 52153642
chr20 52730305 52730316 USF1 JASPAR yes 114011046
chr20 52730306 52730316 SREBF1 JASPAR yes 52153643
chr20 52730306 52730316 SREBF2 JASPAR yes 52153644
chr20 52730306 52730316 TFEC JASPAR yes 52153645
chr20 52730306 52730316 SREBF1 JASPAR yes 114011047
chr20 52730306 52730316 SREBF2 JASPAR yes 114011048
chr20 52730306 52730316 TFEC JASPAR yes 114011049
chr20 52730306 52730317 USF1 JASPAR yes 52153646
chr20 52730306 52730317 USF2 JASPAR yes 52153647
chr20 52730306 52730317 USF1 JASPAR yes 114011050
chr20 52730306 52730317 USF2 JASPAR yes 114011051
SNP sites on vista37207[chr20:52730221-52730319]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista37207[chr20:52730221-52730319]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr20 52553316 52687304 - BCAS1 ENSG00000064787.8 52687304 0.92 0.95 18619 57083
chr20 52769988 52790512 - CYP24A1 ENSG00000019186.5 52790512 0.96 0.98 18620 39807
chr20 52824386 52844591 + PFDN4 ENSG00000101132.5 52824386 0.7 0.98 18621 5933
Expression level of Genes
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miRNAs possibly regulated by vista37207[chr20:52730221-52730319]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results