EnhancerDB
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  3. vista37215[chr20:52749873-52750284]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista37215[chr20:52749873-52750284]
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Tissue distribution of vista37215
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Transcription factor that possibly regulate vista37215[chr20:52749873-52750284]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr20 52748924 52750365 POLR2A UCSC Txn Factor no Conserved 108474520
chr20 52748924 52750365 POLR2A UCSC Txn Factor no Conserved 108474521
chr20 52749129 52750230 EP300 UCSC Txn Factor no Conserved 108474527
chr20 52749129 52750230 EP300 UCSC Txn Factor no Conserved 108474528
chr20 52749178 52750122 TCF7L2 UCSC Txn Factor no Conserved 108474537
chr20 52749178 52750122 TCF7L2 UCSC Txn Factor no Conserved 108474538
chr20 52749308 52749880 TEAD4 UCSC Txn Factor no Conserved 108474567
chr20 52749308 52749880 TEAD4 UCSC Txn Factor no Conserved 108474568
chr20 52749331 52750341 MYBL2 UCSC Txn Factor no Conserved 108474577
chr20 52749331 52750341 MYBL2 UCSC Txn Factor no Conserved 108474578
chr20 52749884 52750294 FOSL2 UCSC Txn Factor no Conserved 108474635
chr20 52750007 52750198 TBP UCSC Txn Factor no Conserved 108474654
chr20 52750043 52750327 FOXA1 UCSC Txn Factor no Conserved 108474659
chr20 52750112 52750331 FOXA2 UCSC Txn Factor no Conserved 108474661
chr20 52749894 52749909 MEF2C JASPAR yes 52156781
chr20 52749894 52749909 MEF2C JASPAR yes 114011594
chr20 52749895 52749910 MEF2A JASPAR yes 52156782
chr20 52749895 52749910 MEF2A JASPAR yes 114011595
chr20 52749907 52749912 NFY TRANSFAC yes 52156783
chr20 52749907 52749912 NFY TRANSFAC yes 114011596
chr20 52749911 52749916 GATA2 JASPAR yes 52156784
chr20 52749911 52749916 GATA2 JASPAR yes 114011597
chr20 52749924 52749929 GATA2 JASPAR yes 52156785
chr20 52749924 52749929 GATA2 JASPAR yes 114011598
chr20 52749936 52749940 ESR1 TRANSFAC yes 52156786
chr20 52749936 52749940 ESR1 TRANSFAC yes 114011599
chr20 52749936 52749947 USF1 JASPAR yes 52156787
chr20 52749936 52749947 USF2 JASPAR yes 52156788
chr20 52749936 52749947 USF1 JASPAR yes 114011600
chr20 52749936 52749947 USF2 JASPAR yes 114011601
chr20 52749950 52749955 ETS2 TRANSFAC yes 52156789
chr20 52749950 52749955 ETS2 TRANSFAC yes 114011602
chr20 52749952 52749963 E2F6 JASPAR yes 52156790
chr20 52749952 52749963 E2F6 JASPAR yes 114011603
chr20 52749953 52749964 TBX20 JASPAR yes 52156791
chr20 52749953 52749964 TBX20 JASPAR yes 114011604
chr20 52749955 52749963 TBX15 JASPAR yes 52156792
chr20 52749955 52749963 TBX15 JASPAR yes 114011605
chr20 52749961 52749972 FLI1 JASPAR yes 52156793
chr20 52749961 52749972 FLI1 JASPAR yes 114011606
chr20 52749963 52749971 EHF JASPAR yes 52156794
chr20 52749963 52749971 EHF JASPAR yes 114011607
chr20 52749967 52749975 MEIS2 JASPAR yes 52156795
chr20 52749967 52749975 MEIS3 JASPAR yes 52156796
chr20 52749967 52749975 MEIS2 JASPAR yes 114011608
chr20 52749967 52749975 MEIS3 JASPAR yes 114011609
chr20 52749968 52749972 NFE TRANSFAC yes 52156797
chr20 52749968 52749972 NFE TRANSFAC yes 114011610
chr20 52749979 52749994 SCRT1 JASPAR yes 52156798
chr20 52749979 52749994 SCRT1 JASPAR yes 114011611
chr20 52749984 52749999 RFX5 JASPAR yes 52156799
chr20 52749984 52749999 RFX5 JASPAR yes 114011612
chr20 52750000 52750018 RARA JASPAR yes 52156800
chr20 52750000 52750018 RARA JASPAR yes 114011613
chr20 52750006 52750010 YY1 TRANSFAC yes 52156801
chr20 52750006 52750010 YY1 TRANSFAC yes 114011614
chr20 52750026 52750036 TFCP2 JASPAR yes 52156802
chr20 52750026 52750036 TFCP2 JASPAR yes 114011615
chr20 52750049 52750054 ETS2 TRANSFAC yes 52156803
chr20 52750049 52750054 ETS2 TRANSFAC yes 114011616
chr20 52750057 52750071 JUN JASPAR yes 52156804
chr20 52750057 52750071 JUN JASPAR yes 114011617
chr20 52750059 52750070 BATF JASPAR yes 52156805
chr20 52750059 52750070 BATF JASPAR yes 114011618
chr20 52750060 52750071 JUNB JASPAR yes 52156806
chr20 52750060 52750071 NFE2L2 JASPAR yes 52156807
chr20 52750060 52750071 JUNB JASPAR yes 114011619
chr20 52750060 52750071 NFE2L2 JASPAR yes 114011620
chr20 52750061 52750072 FOS JASPAR yes 52156808
chr20 52750061 52750072 FOSL1 JASPAR yes 52156809
chr20 52750061 52750072 JUND JASPAR yes 52156810
chr20 52750061 52750072 NFE2 JASPAR yes 52156811
chr20 52750061 52750072 FOS JASPAR yes 114011621
chr20 52750061 52750072 FOSL1 JASPAR yes 114011622
chr20 52750061 52750072 JUND JASPAR yes 114011623
chr20 52750061 52750072 NFE2 JASPAR yes 114011624
chr20 52750062 52750071 JDP2 JASPAR yes 52156812
chr20 52750062 52750071 JDP2 JASPAR yes 114011625
chr20 52750062 52750073 FOSL2 JASPAR yes 52156813
chr20 52750062 52750073 JUNB JASPAR yes 52156814
chr20 52750062 52750073 FOSL2 JASPAR yes 114011626
chr20 52750062 52750073 JUNB JASPAR yes 114011627
chr20 52750082 52750099 BCL6B JASPAR yes 52156815
chr20 52750082 52750099 BCL6B JASPAR yes 114011628
chr20 52750090 52750104 IRF7 JASPAR yes 52156816
chr20 52750090 52750104 IRF7 JASPAR yes 114011629
chr20 52750091 52750106 PRDM1 JASPAR yes 52156817
chr20 52750091 52750106 PRDM1 JASPAR yes 114011630
chr20 52750091 52750109 IRF2 JASPAR yes 52156818
chr20 52750091 52750109 IRF2 JASPAR yes 114011631
chr20 52750092 52750104 IRF1 JASPAR yes 52156819
chr20 52750092 52750104 IRF1 JASPAR yes 114011632
chr20 52750097 52750109 PKNOX1 JASPAR yes 52156820
chr20 52750097 52750109 TGIF1 JASPAR yes 52156821
chr20 52750097 52750109 TGIF2 JASPAR yes 52156822
chr20 52750097 52750109 PKNOX1 JASPAR yes 114011633
chr20 52750097 52750109 TGIF1 JASPAR yes 114011634
chr20 52750097 52750109 TGIF2 JASPAR yes 114011635
chr20 52750108 52750114 TCF4 TRANSFAC yes 52156823
chr20 52750108 52750114 TCF4 TRANSFAC yes 114011636
chr20 52750118 52750127 NKX2-8 JASPAR yes 52156824
chr20 52750118 52750127 NKX2-8 JASPAR yes 114011637
chr20 52750147 52750162 HNF1A JASPAR yes 52156825
chr20 52750147 52750162 HNF1A JASPAR yes 114011638
chr20 52750149 52750161 HNF1B JASPAR yes 52156826
chr20 52750149 52750161 HNF1B JASPAR yes 114011639
chr20 52750150 52750165 MYBL2 JASPAR yes 52156827
chr20 52750150 52750165 MYBL2 JASPAR yes 114011640
chr20 52750157 52750160 MYB TRANSFAC yes 52156828
chr20 52750157 52750160 MYB TRANSFAC yes 114011641
chr20 52750161 52750171 REL JASPAR yes 52156829
chr20 52750161 52750171 REL JASPAR yes 114011642
chr20 52750161 52750172 NFKB1 JASPAR yes 52156830
chr20 52750161 52750172 NFKB1 JASPAR yes 114011643
chr20 52750164 52750168 YY1 TRANSFAC yes 52156831
chr20 52750164 52750168 YY1 TRANSFAC yes 114011644
chr20 52750164 52750175 ELF5 JASPAR yes 52156832
chr20 52750164 52750175 ELF5 JASPAR yes 114011645
chr20 52750165 52750173 FEV JASPAR yes 52156833
chr20 52750165 52750173 FEV JASPAR yes 114011646
chr20 52750167 52750172 ETS2 TRANSFAC yes 52156834
chr20 52750167 52750172 ETS2 TRANSFAC yes 114011647
chr20 52750216 52750220 YY1 TRANSFAC yes 52156835
chr20 52750216 52750220 YY1 TRANSFAC yes 114011648
chr20 52750220 52750234 SPI1 JASPAR yes 52156836
chr20 52750220 52750234 SPI1 JASPAR yes 114011649
chr20 52750230 52750234 YY1 TRANSFAC yes 52156837
chr20 52750230 52750234 YY1 TRANSFAC yes 114011650
chr20 52750251 52750265 FOXF2 JASPAR yes 52156838
chr20 52750251 52750265 FOXF2 JASPAR yes 114011651
chr20 52750252 52750262 MEF2A JASPAR yes 52156839
chr20 52750252 52750262 MEF2A JASPAR yes 114011652
chr20 52750253 52750257 YY1 TRANSFAC yes 52156840
chr20 52750253 52750257 YY1 TRANSFAC yes 114011653
chr20 52750253 52750263 HOXC10 JASPAR yes 52156841
chr20 52750253 52750263 HOXD11 JASPAR yes 52156842
chr20 52750253 52750263 HOXC10 JASPAR yes 114011654
chr20 52750253 52750263 HOXD11 JASPAR yes 114011655
chr20 52750253 52750271 MAFF JASPAR yes 52156843
chr20 52750253 52750271 MAFF JASPAR yes 114011656
chr20 52750273 52750287 BATF3 JASPAR yes 52156844
chr20 52750273 52750287 BATF3 JASPAR yes 114011657
SNP sites on vista37215[chr20:52749873-52750284]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista37215[chr20:52749873-52750284]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr20 52553316 52687304 - BCAS1 ENSG00000064787.8 52687304 0.92 0.95 18619 37431
chr20 52769988 52790512 - CYP24A1 ENSG00000019186.5 52790512 0.96 0.98 18620 59772
chr20 52824386 52844591 + PFDN4 ENSG00000101132.5 52824386 0.7 0.98 18621 25898
Expression level of Genes
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miRNAs possibly regulated by vista37215[chr20:52749873-52750284]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results