EnhancerDB
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  3. vista37220[chr20:52812299-52812959]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista37220[chr20:52812299-52812959]
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Tissue distribution of vista37220
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Transcription factor that possibly regulate vista37220[chr20:52812299-52812959]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr20 52812289 52812299 SREBF1 JASPAR yes 52162069
chr20 52812289 52812299 SREBF2 JASPAR yes 52162070
chr20 52812289 52812299 SREBF1 JASPAR yes 114011898
chr20 52812289 52812299 SREBF1 JASPAR yes 114011899
chr20 52812289 52812299 SREBF2 JASPAR yes 114011900
chr20 52812289 52812299 SREBF2 JASPAR yes 114011901
chr20 52812301 52812320 REST JASPAR yes 52162071
chr20 52812301 52812320 REST JASPAR yes 114011902
chr20 52812321 52812325 NFE TRANSFAC yes 52162072
chr20 52812321 52812325 NFE TRANSFAC yes 114011903
chr20 52812321 52812326 GATA1 TRANSFAC yes 52162073
chr20 52812321 52812326 GATA1 TRANSFAC yes 114011904
chr20 52812321 52812327 GATA3 JASPAR yes 52162074
chr20 52812321 52812327 GATA3 JASPAR yes 114011905
chr20 52812323 52812337 SPI1 JASPAR yes 52162075
chr20 52812323 52812337 SPI1 JASPAR yes 114011906
chr20 52812343 52812364 ZNF263 JASPAR yes 52162076
chr20 52812343 52812364 ZNF263 JASPAR yes 114011907
chr20 52812353 52812359 MZF1 JASPAR yes 52162077
chr20 52812353 52812359 MZF1 JASPAR yes 114011908
chr20 52812362 52812372 SP1 JASPAR yes 52162078
chr20 52812362 52812372 SP1 JASPAR yes 114011909
chr20 52812363 52812374 E2F6 JASPAR yes 52162079
chr20 52812363 52812374 E2F6 JASPAR yes 114011910
chr20 52812407 52812411 NFE TRANSFAC yes 52162080
chr20 52812407 52812411 NFE TRANSFAC yes 114011911
chr20 52812408 52812418 SMAD3 JASPAR yes 52162081
chr20 52812408 52812418 SMAD3 JASPAR yes 114011912
chr20 52812428 52812445 PAX1 JASPAR yes 52162082
chr20 52812428 52812445 PAX9 JASPAR yes 52162083
chr20 52812428 52812445 PAX1 JASPAR yes 114011913
chr20 52812428 52812445 PAX9 JASPAR yes 114011914
chr20 52812429 52812443 PAX6 JASPAR yes 52162084
chr20 52812429 52812443 PAX6 JASPAR yes 114011915
chr20 52812429 52812448 PAX5 JASPAR yes 52162085
chr20 52812429 52812448 PAX5 JASPAR yes 114011916
chr20 52812457 52812477 PPARG JASPAR yes 52162086
chr20 52812457 52812477 PPARG JASPAR yes 114011917
chr20 52812463 52812475 PKNOX1 JASPAR yes 52162087
chr20 52812463 52812475 PKNOX1 JASPAR yes 114011918
chr20 52812470 52812473 MYB TRANSFAC yes 52162088
chr20 52812470 52812473 MYB TRANSFAC yes 114011919
chr20 52812502 52812513 BATF JASPAR yes 52162089
chr20 52812502 52812513 BATF JASPAR yes 114011920
chr20 52812503 52812514 JUNB JASPAR yes 52162090
chr20 52812503 52812514 JUNB JASPAR yes 114011921
chr20 52812505 52812514 JDP2 JASPAR yes 52162091
chr20 52812505 52812514 JDP2 JASPAR yes 114011922
chr20 52812517 52812522 MYB TRANSFAC yes 52162092
chr20 52812517 52812522 MYB TRANSFAC yes 114011923
chr20 52812522 52812537 LEF1 JASPAR yes 52162093
chr20 52812522 52812537 LEF1 JASPAR yes 114011924
chr20 52812575 52812579 NFE TRANSFAC yes 52162094
chr20 52812575 52812579 NFE TRANSFAC yes 114011925
chr20 52812588 52812596 GATA3 JASPAR yes 52162095
chr20 52812588 52812596 GATA3 JASPAR yes 114011926
chr20 52812589 52812610 ZNF263 JASPAR yes 52162096
chr20 52812589 52812610 ZNF263 JASPAR yes 114011927
chr20 52812591 52812610 REST JASPAR yes 52162097
chr20 52812591 52812610 REST JASPAR yes 114011928
chr20 52812593 52812608 AR JASPAR yes 52162098
chr20 52812593 52812608 AR JASPAR yes 114011929
chr20 52812604 52812622 IRF2 JASPAR yes 52162099
chr20 52812604 52812622 IRF2 JASPAR yes 114011930
chr20 52812605 52812626 IRF1 JASPAR yes 52162100
chr20 52812605 52812626 IRF1 JASPAR yes 114011931
chr20 52812607 52812622 PRDM1 JASPAR yes 52162101
chr20 52812607 52812622 STAT2 JASPAR yes 52162102
chr20 52812607 52812622 PRDM1 JASPAR yes 114011932
chr20 52812607 52812622 STAT2 JASPAR yes 114011933
chr20 52812608 52812622 STAT1 JASPAR yes 52162103
chr20 52812608 52812622 STAT1 JASPAR yes 114011934
chr20 52812609 52812621 IRF1 JASPAR yes 52162104
chr20 52812609 52812621 IRF1 JASPAR yes 114011935
chr20 52812609 52812624 IRF9 JASPAR yes 52162105
chr20 52812609 52812624 IRF9 JASPAR yes 114011936
chr20 52812613 52812626 ELF3 JASPAR yes 52162106
chr20 52812613 52812626 ELF3 JASPAR yes 114011937
chr20 52812621 52812639 IRF2 JASPAR yes 52162107
chr20 52812621 52812639 IRF2 JASPAR yes 114011938
chr20 52812622 52812643 IRF1 JASPAR yes 52162108
chr20 52812622 52812643 IRF1 JASPAR yes 114011939
chr20 52812624 52812639 STAT2 JASPAR yes 52162109
chr20 52812624 52812639 STAT2 JASPAR yes 114011940
chr20 52812625 52812639 SPI1 JASPAR yes 52162110
chr20 52812625 52812639 SPI1 JASPAR yes 114011941
chr20 52812646 52812664 SRF JASPAR yes 52162111
chr20 52812646 52812664 SRF JASPAR yes 114011942
chr20 52812657 52812671 TLX1 JASPAR yes 52162112
chr20 52812657 52812671 TLX1 JASPAR yes 114011943
chr20 52812658 52812672 TLX1 JASPAR yes 52162113
chr20 52812658 52812672 TLX1 JASPAR yes 114011944
chr20 52812690 52812694 YY1 TRANSFAC yes 52162114
chr20 52812690 52812694 YY1 TRANSFAC yes 114011945
chr20 52812704 52812715 FOXA1 JASPAR yes 52162115
chr20 52812704 52812715 FOXA1 JASPAR yes 114011946
chr20 52812704 52812719 FOXA1 JASPAR yes 52162116
chr20 52812704 52812719 FOXA1 JASPAR yes 114011947
chr20 52812754 52812772 NFYA JASPAR yes 52162117
chr20 52812754 52812772 NFYA JASPAR yes 114011948
chr20 52812757 52812773 NFYA JASPAR yes 52162118
chr20 52812757 52812773 NFYA JASPAR yes 114011949
chr20 52812760 52812775 NFYB JASPAR yes 52162119
chr20 52812760 52812775 NFYB JASPAR yes 114011950
chr20 52812762 52812767 NFY TRANSFAC yes 52162120
chr20 52812762 52812767 NFY TRANSFAC yes 114011951
chr20 52812777 52812798 REST JASPAR yes 52162121
chr20 52812777 52812798 REST JASPAR yes 114011952
chr20 52812778 52812797 REST JASPAR yes 52162122
chr20 52812778 52812797 REST JASPAR yes 114011953
chr20 52812799 52812810 USF1 JASPAR yes 52162123
chr20 52812799 52812810 USF1 JASPAR yes 114011954
chr20 52812800 52812810 BHLHE41 JASPAR yes 52162124
chr20 52812800 52812810 SREBF2 JASPAR yes 52162125
chr20 52812800 52812810 TFE3 JASPAR yes 52162126
chr20 52812800 52812810 TFEB JASPAR yes 52162127
chr20 52812800 52812810 TFEC JASPAR yes 52162128
chr20 52812800 52812810 BHLHE41 JASPAR yes 114011955
chr20 52812800 52812810 SREBF2 JASPAR yes 114011956
chr20 52812800 52812810 TFE3 JASPAR yes 114011957
chr20 52812800 52812810 TFEB JASPAR yes 114011958
chr20 52812800 52812810 TFEC JASPAR yes 114011959
chr20 52812800 52812811 USF1 JASPAR yes 52162129
chr20 52812800 52812811 USF2 JASPAR yes 52162130
chr20 52812800 52812811 USF1 JASPAR yes 114011960
chr20 52812800 52812811 USF2 JASPAR yes 114011961
chr20 52812878 52812888 MAX JASPAR yes 52162131
chr20 52812878 52812888 MAX JASPAR yes 114011962
chr20 52812878 52812889 USF1 JASPAR yes 52162132
chr20 52812878 52812889 USF2 JASPAR yes 52162133
chr20 52812878 52812889 USF1 JASPAR yes 114011963
chr20 52812878 52812889 USF2 JASPAR yes 114011964
chr20 52812884 52812894 SREBF2 JASPAR yes 52162134
chr20 52812884 52812894 SREBF2 JASPAR yes 114011965
chr20 52812893 52812914 ZNF263 JASPAR yes 52162135
chr20 52812893 52812914 ZNF263 JASPAR yes 114011966
chr20 52812896 52812902 PEA3 TRANSFAC yes 52162136
chr20 52812896 52812902 PEA3 TRANSFAC yes 114011967
chr20 52812896 52812906 SP1 JASPAR yes 52162137
chr20 52812896 52812906 SP1 JASPAR yes 114011968
chr20 52812896 52812907 FLI1 JASPAR yes 52162138
chr20 52812896 52812907 FLI1 JASPAR yes 114011969
chr20 52812897 52812905 EHF JASPAR yes 52162139
chr20 52812897 52812905 EHF JASPAR yes 114011970
chr20 52812897 52812907 SP1 JASPAR yes 52162140
chr20 52812897 52812907 SP1 JASPAR yes 114011971
chr20 52812904 52812910 MAZ TRANSFAC yes 52162141
chr20 52812904 52812910 MAZ TRANSFAC yes 114011972
chr20 52812909 52812913 H4TF2 TRANSFAC yes 52162142
chr20 52812909 52812913 H4TF2 TRANSFAC yes 114011973
chr20 52812918 52812923 MYB TRANSFAC yes 52162143
chr20 52812918 52812923 MYB TRANSFAC yes 114011974
SNP sites on vista37220[chr20:52812299-52812959]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista37220[chr20:52812299-52812959]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr20 52769988 52790512 - CYP24A1 ENSG00000019186.5 52790512 0.96 0.98 18620 78213
chr20 52824386 52844591 + PFDN4 ENSG00000101132.5 52824386 0.7 0.98 18621 88573
Expression level of Genes
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miRNAs possibly regulated by vista37220[chr20:52812299-52812959]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results