EnhancerDB
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  3. vista37222[chr20:52816252-52816427]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista37222[chr20:52816252-52816427]
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Tissue distribution of vista37222
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Transcription factor that possibly regulate vista37222[chr20:52816252-52816427]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr20 52816166 52816589 CTCF UCSC Txn Factor no Conserved 108474768
chr20 52816216 52816500 SMC3 UCSC Txn Factor no Conserved 108474774
chr20 52816222 52816482 RAD21 UCSC Txn Factor no Conserved 108474776
chr20 52816247 52816259 IRF1 JASPAR yes 52162642
chr20 52816247 52816259 IRF1 JASPAR yes 114012022
chr20 52816257 52816264 NKX3-1 JASPAR yes 52162643
chr20 52816257 52816264 NKX3-1 JASPAR yes 114012023
chr20 52816262 52816265 MYB TRANSFAC yes 52162644
chr20 52816262 52816265 MYB TRANSFAC yes 114012024
chr20 52816265 52816269 YY1 TRANSFAC yes 52162645
chr20 52816265 52816269 YY1 TRANSFAC yes 114012025
chr20 52816266 52816277 NFE2L2 JASPAR yes 52162646
chr20 52816266 52816277 NFE2L2 JASPAR yes 114012026
chr20 52816307 52816313 ETS1 JASPAR yes 52162647
chr20 52816307 52816313 SPI1 JASPAR yes 52162648
chr20 52816307 52816313 ETS1 JASPAR yes 114012027
chr20 52816307 52816313 SPI1 JASPAR yes 114012028
chr20 52816313 52816319 ZNF354C JASPAR yes 52162649
chr20 52816313 52816319 ZNF354C JASPAR yes 114012029
chr20 52816316 52816328 POU2F1 JASPAR yes 52162650
chr20 52816316 52816328 POU2F1 JASPAR yes 114012030
chr20 52816318 52816330 PBX1 JASPAR yes 52162651
chr20 52816318 52816330 PBX1 JASPAR yes 114012031
chr20 52816319 52816333 POU4F1 JASPAR yes 52162652
chr20 52816319 52816333 POU4F1 JASPAR yes 114012032
chr20 52816335 52816340 TFAP2A TRANSFAC yes 52162653
chr20 52816335 52816340 TFAP2A TRANSFAC yes 114012033
chr20 52816335 52816341 MZF1 JASPAR yes 52162654
chr20 52816335 52816341 MZF1 JASPAR yes 114012034
chr20 52816344 52816348 NFE TRANSFAC yes 52162655
chr20 52816344 52816348 NFE TRANSFAC yes 114012035
chr20 52816358 52816377 CTCF JASPAR yes 52162656
chr20 52816358 52816377 CTCF JASPAR yes 114012036
chr20 52816369 52816381 E2F1 JASPAR yes 52162657
chr20 52816369 52816381 E2F1 JASPAR yes 114012037
chr20 52816373 52816381 E2F1 JASPAR yes 52162658
chr20 52816373 52816381 E2F1 JASPAR yes 114012038
chr20 52816384 52816398 PAX6 JASPAR yes 52162659
chr20 52816384 52816398 PAX6 JASPAR yes 114012039
chr20 52816400 52816405 TFAP2A TRANSFAC yes 52162660
chr20 52816400 52816405 TFAP2A TRANSFAC yes 114012040
chr20 52816400 52816406 MZF1 JASPAR yes 52162661
chr20 52816400 52816406 MZF1 JASPAR yes 114012041
chr20 52816413 52816434 ZNF263 JASPAR yes 52162662
chr20 52816413 52816434 ZNF263 JASPAR yes 114012042
SNP sites on vista37222[chr20:52816252-52816427]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista37222[chr20:52816252-52816427]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr20 52769988 52790512 - CYP24A1 ENSG00000019186.5 52790512 0.96 0.98 18620 74260
chr20 52824386 52844591 + PFDN4 ENSG00000101132.5 52824386 0.7 0.98 18621 92041
Expression level of Genes
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miRNAs possibly regulated by vista37222[chr20:52816252-52816427]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results