EnhancerDB
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  3. vista3725[chr1:165319408-165319638]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3725[chr1:165319408-165319638]
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Tissue distribution of vista3725
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Transcription factor that possibly regulate vista3725[chr1:165319408-165319638]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 165319408 165319423 FOXP1 JASPAR yes 118390813
chr1 165319409 165319424 FOXP1 JASPAR yes 118390814
chr1 165319409 165319430 IRF1 JASPAR yes 118390815
chr1 165319410 165319425 FOXP1 JASPAR yes 118390816
chr1 165319410 165319431 IRF1 JASPAR yes 118390817
chr1 165319411 165319426 FOXP1 JASPAR yes 118390818
chr1 165319411 165319432 IRF1 JASPAR yes 118390819
chr1 165319412 165319427 FOXP1 JASPAR yes 118390820
chr1 165319412 165319433 IRF1 JASPAR yes 118390821
chr1 165319413 165319428 FOXP1 JASPAR yes 118390822
chr1 165319413 165319434 IRF1 JASPAR yes 118390823
chr1 165319414 165319429 FOXP1 JASPAR yes 118390824
chr1 165319414 165319435 IRF1 JASPAR yes 118390825
chr1 165319415 165319430 FOXP1 JASPAR yes 118390826
chr1 165319415 165319436 IRF1 JASPAR yes 118390827
chr1 165319416 165319431 FOXP1 JASPAR yes 118390828
chr1 165319416 165319437 IRF1 JASPAR yes 118390829
chr1 165319417 165319432 FOXP1 JASPAR yes 118390830
chr1 165319417 165319438 IRF1 JASPAR yes 118390831
chr1 165319418 165319433 FOXP1 JASPAR yes 118390832
chr1 165319418 165319439 IRF1 JASPAR yes 118390833
chr1 165319419 165319434 FOXP1 JASPAR yes 118390834
chr1 165319419 165319440 IRF1 JASPAR yes 118390835
chr1 165319420 165319435 FOXP1 JASPAR yes 118390836
chr1 165319423 165319438 STAT2 JASPAR yes 118390837
chr1 165319439 165319454 FOXA1 JASPAR yes 118390838
chr1 165319441 165319449 FOXL1 JASPAR yes 118390839
chr1 165319441 165319452 FOXP2 JASPAR yes 118390840
chr1 165319441 165319453 FOXC2 JASPAR yes 118390841
chr1 165319442 165319450 FOXD1 JASPAR yes 118390842
chr1 165319442 165319450 FOXG1 JASPAR yes 118390843
chr1 165319442 165319450 FOXO3 JASPAR yes 118390844
chr1 165319442 165319453 FOXB1 JASPAR yes 118390845
chr1 165319442 165319453 FOXC1 JASPAR yes 118390846
chr1 165319443 165319450 FOXD2 JASPAR yes 118390847
chr1 165319443 165319450 FOXI1 JASPAR yes 118390848
chr1 165319443 165319450 FOXL1 JASPAR yes 118390849
chr1 165319443 165319450 FOXO4 JASPAR yes 118390850
chr1 165319443 165319450 FOXO6 JASPAR yes 118390851
chr1 165319443 165319450 FOXP3 JASPAR yes 118390852
chr1 165319443 165319451 FOXO3 JASPAR yes 118390853
chr1 165319443 165319454 FOXA1 JASPAR yes 118390854
chr1 165319455 165319459 YY1 TRANSFAC yes 118390855
chr1 165319464 165319482 NR3C1 JASPAR yes 118390856
chr1 165319465 165319472 SPIB JASPAR yes 118390857
chr1 165319478 165319484 LEF1 TRANSFAC yes 118390858
chr1 165319478 165319484 SOX10 JASPAR yes 118390859
chr1 165319482 165319490 DLX6 JASPAR yes 118390860
chr1 165319482 165319490 MSX1 JASPAR yes 118390861
chr1 165319517 165319536 CTCF JASPAR yes 118390862
chr1 165319523 165319534 EBF1 JASPAR yes 118390863
chr1 165319531 165319536 GATA2 JASPAR yes 118390864
chr1 165319552 165319558 GATA3 JASPAR yes 118390865
chr1 165319598 165319609 EBF1 JASPAR yes 118390866
chr1 165319615 165319621 YY1 JASPAR yes 118390867
SNP sites on vista3725[chr1:165319408-165319638]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 165319410 rs572121750 CAAAAAAAAA C
FOXP1 IRF1
692999
chr1 165319410 rs774497125 CAAAAAAAAA C
FOXP1 IRF1
693000
chr1 165319500 rs144011393 A G no 693001
chr1 165319539 rs17468805 T C no 693002
chr1 165319565 rs577230203 T G no 693003
chr1 165319628 rs114578159 A G no 693004
Genes possibly regulated by vista3725[chr1:165319408-165319638]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 165171104 165325952 - LMX1A ENSG00000162761.10 165325952 0.92 1.0 1514 93686
chr1 165370159 165414433 - RXRG ENSG00000143171.8 165414433 0.8 0.0 1515 5205
Expression level of Genes
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miRNAs possibly regulated by vista3725[chr1:165319408-165319638]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results