EnhancerDB
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  3. vista3728[chr1:165506688-165506898]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3728[chr1:165506688-165506898]
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Tissue distribution of vista3728
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Transcription factor that possibly regulate vista3728[chr1:165506688-165506898]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 165506701 165506714 ELF1 JASPAR yes 118390949
chr1 165506723 165506734 BATF JASPAR yes 118390950
chr1 165506725 165506736 FOSL1 JASPAR yes 118390951
chr1 165506727 165506738 BATF JASPAR yes 118390952
chr1 165506741 165506750 NKX3-2 JASPAR yes 118390953
chr1 165506741 165506751 NKX2-3 JASPAR yes 118390954
chr1 165506742 165506750 ISL2 JASPAR yes 118390955
chr1 165506742 165506751 NKX2-8 JASPAR yes 118390956
chr1 165506771 165506783 FOXI1 JASPAR yes 118390957
chr1 165506772 165506787 SCRT1 JASPAR yes 118390958
chr1 165506774 165506786 GRHL1 JASPAR yes 118390959
chr1 165506780 165506791 CEBPB JASPAR yes 118390960
chr1 165506781 165506791 CEBPG JASPAR yes 118390961
chr1 165506781 165506792 CEBPA JASPAR yes 118390962
chr1 165506798 165506813 STAT2 JASPAR yes 118390963
chr1 165506799 165506813 STAT1 JASPAR yes 118390964
chr1 165506803 165506810 SPIB JASPAR yes 118390965
chr1 165506812 165506816 H1TF2 TRANSFAC yes 118390966
chr1 165506812 165506816 NFE TRANSFAC yes 118390967
chr1 165506812 165506816 SRF TRANSFAC yes 118390968
chr1 165506840 165506854 PLAG1 JASPAR yes 118390969
chr1 165506850 165506861 FLI1 JASPAR yes 118390970
chr1 165506851 165506862 SPDEF JASPAR yes 118390971
chr1 165506874 165506889 AR JASPAR yes 118390972
chr1 165506878 165506893 ZIC3 JASPAR yes 118390973
chr1 165506878 165506893 ZIC4 JASPAR yes 118390974
chr1 165506879 165506893 ZIC1 JASPAR yes 118390975
chr1 165506891 165506895 YY1 TRANSFAC yes 118390976
SNP sites on vista3728[chr1:165506688-165506898]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 165506721 rs546407621 G C no 693981
chr1 165506789 rs61800629 A T
CEBPA CEBPB CEBPG
693982
chr1 165506819 rs116836535 C A no 693983
chr1 165506820 rs369231 G A no 693984
chr1 165506898 rs113768173 G A no 693985
Genes possibly regulated by vista3728[chr1:165506688-165506898]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 165370159 165414433 - RXRG ENSG00000143171.8 165414433 0.8 0.0 1515 7745
chr1 165513244 165533198 + LRRC52 ENSG00000162763.3 165513244 0.88 0.0 1516 93654
chr1 165600098 165631033 + MGST3 ENSG00000143198.8 165600098 0.73 1.0 1517 6800
Expression level of Genes
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miRNAs possibly regulated by vista3728[chr1:165506688-165506898]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results