EnhancerDB
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  3. vista3730[chr1:165674774-165675083]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3730[chr1:165674774-165675083]
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Tissue distribution of vista3730
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Transcription factor that possibly regulate vista3730[chr1:165674774-165675083]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 165674774 165674789 FOXP1 JASPAR yes 118391035
chr1 165674775 165674781 TBP TRANSFAC yes 118391036
chr1 165674775 165674790 FOXP1 JASPAR yes 118391037
chr1 165674775 165674796 IRF1 JASPAR yes 118391038
chr1 165674776 165674791 FOXP1 JASPAR yes 118391039
chr1 165674776 165674797 IRF1 JASPAR yes 118391040
chr1 165674777 165674792 FOXP1 JASPAR yes 118391041
chr1 165674777 165674798 IRF1 JASPAR yes 118391042
chr1 165674778 165674793 FOXP1 JASPAR yes 118391043
chr1 165674778 165674799 IRF1 JASPAR yes 118391044
chr1 165674779 165674794 FOXP1 JASPAR yes 118391045
chr1 165674779 165674800 IRF1 JASPAR yes 118391046
chr1 165674780 165674795 FOXP1 JASPAR yes 118391047
chr1 165674780 165674801 IRF1 JASPAR yes 118391048
chr1 165674781 165674796 FOXP1 JASPAR yes 118391049
chr1 165674781 165674802 IRF1 JASPAR yes 118391050
chr1 165674782 165674797 FOXP1 JASPAR yes 118391051
chr1 165674782 165674803 IRF1 JASPAR yes 118391052
chr1 165674783 165674798 FOXP1 JASPAR yes 118391053
chr1 165674784 165674799 FOXP1 JASPAR yes 118391054
chr1 165674785 165674800 FOXP1 JASPAR yes 118391055
chr1 165674785 165674806 IRF1 JASPAR yes 118391056
chr1 165674786 165674801 FOXP1 JASPAR yes 118391057
chr1 165674789 165674804 STAT2 JASPAR yes 118391058
chr1 165674821 165674839 SRF JASPAR yes 118391059
chr1 165674822 165674837 MEF2C JASPAR yes 118391060
chr1 165674857 165674865 BARX1 JASPAR yes 118391061
chr1 165674860 165674871 HOXA10 JASPAR yes 118391062
chr1 165674861 165674871 HOXD13 JASPAR yes 118391063
chr1 165674903 165674910 MEIS1 JASPAR yes 118391064
chr1 165674903 165674911 MEIS2 JASPAR yes 118391065
chr1 165674907 165674919 TEAD1 JASPAR yes 118391066
chr1 165674909 165674919 TEAD1 JASPAR yes 118391067
chr1 165674915 165674925 HOXB2 JASPAR yes 118391068
chr1 165674915 165674925 MEOX1 JASPAR yes 118391069
chr1 165674915 165674925 MEOX2 JASPAR yes 118391070
chr1 165674945 165674960 FOXP1 JASPAR yes 118391071
chr1 165674948 165674958 HOXA13 JASPAR yes 118391072
chr1 165674948 165674958 HOXB13 JASPAR yes 118391073
chr1 165674948 165674958 HOXD13 JASPAR yes 118391074
chr1 165674948 165674959 HOXA10 JASPAR yes 118391075
chr1 165674949 165674958 CDX1 JASPAR yes 118391076
chr1 165674949 165674960 CDX2 JASPAR yes 118391077
chr1 165674960 165674975 FOXA1 JASPAR yes 118391078
chr1 165674961 165674972 FOXB1 JASPAR yes 118391079
chr1 165674961 165674972 FOXC1 JASPAR yes 118391080
chr1 165674979 165674983 YY1 TRANSFAC yes 118391081
chr1 165674992 165675007 MEF2A JASPAR yes 118391082
chr1 165674993 165675008 MEF2C JASPAR yes 118391083
chr1 165674996 165675000 YY1 TRANSFAC yes 118391084
chr1 165674996 165675007 PROP1 JASPAR yes 118391085
chr1 165674998 165675009 HOXA10 JASPAR yes 118391086
chr1 165674999 165675009 ALX3 JASPAR yes 118391087
chr1 165674999 165675009 GSX2 JASPAR yes 118391088
chr1 165674999 165675009 MNX1 JASPAR yes 118391089
chr1 165674999 165675011 MEF2A JASPAR yes 118391090
chr1 165675000 165675008 LMX1A JASPAR yes 118391091
chr1 165675000 165675008 LMX1B JASPAR yes 118391092
chr1 165675000 165675008 NKX6-1 JASPAR yes 118391093
chr1 165675000 165675008 NKX6-2 JASPAR yes 118391094
chr1 165675000 165675008 VAX1 JASPAR yes 118391095
chr1 165675000 165675008 VAX2 JASPAR yes 118391096
chr1 165675000 165675008 VSX1 JASPAR yes 118391097
chr1 165675000 165675008 VSX2 JASPAR yes 118391098
chr1 165675001 165675012 PHOX2A JASPAR yes 118391099
chr1 165675001 165675012 PROP1 JASPAR yes 118391100
chr1 165675004 165675025 IRF1 JASPAR yes 118391101
chr1 165675005 165675017 FOXC2 JASPAR yes 118391102
chr1 165675006 165675017 FOXC1 JASPAR yes 118391103
chr1 165675007 165675011 YY1 TRANSFAC yes 118391104
chr1 165675008 165675022 IRF7 JASPAR yes 118391105
chr1 165675013 165675026 POU2F2 JASPAR yes 118391106
chr1 165675013 165675027 POU1F1 JASPAR yes 118391107
chr1 165675014 165675026 POU3F1 JASPAR yes 118391108
chr1 165675014 165675026 POU3F2 JASPAR yes 118391109
chr1 165675014 165675027 POU3F3 JASPAR yes 118391110
chr1 165675015 165675027 POU2F1 JASPAR yes 118391111
chr1 165675016 165675025 POU3F4 JASPAR yes 118391112
chr1 165675016 165675025 POU5F1B JASPAR yes 118391113
chr1 165675018 165675034 POU4F3 JASPAR yes 118391114
chr1 165675030 165675040 NFAT4 TRANSFAC yes 118391115
chr1 165675031 165675035 YY1 TRANSFAC yes 118391116
chr1 165675033 165675043 NFATC3 JASPAR yes 118391117
chr1 165675034 165675041 NFATC2 JASPAR yes 118391118
chr1 165675055 165675069 POU1F1 JASPAR yes 118391119
chr1 165675056 165675067 PROP1 JASPAR yes 118391120
chr1 165675066 165675080 POU4F1 JASPAR yes 118391121
chr1 165675066 165675082 POU4F2 JASPAR yes 118391122
chr1 165675066 165675082 POU4F3 JASPAR yes 118391123
SNP sites on vista3730[chr1:165674774-165675083]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 165674834 rs72698091 G T
MEF2C SRF
694737
chr1 165674952 rs79061090 T A
CDX1 CDX2 FOXP1 HOXA10 HOXA13 HOXB13 HOXD13
694738
chr1 165674960 rs568195096 T C
CDX2 FOXA1 FOXP1
694739
Genes possibly regulated by vista3730[chr1:165674774-165675083]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 165600098 165631033 + MGST3 ENSG00000143198.8 165600098 0.73 1.0 1517 25324
chr1 165631453 165668100 - ALDH9A1 ENSG00000143149.8 165668100 0.62 0.99 1518 93326
Expression level of Genes
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miRNAs possibly regulated by vista3730[chr1:165674774-165675083]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results