EnhancerDB
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  3. vista374[chr1:12050736-12051137]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista374[chr1:12050736-12051137]
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Tissue distribution of vista374
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Transcription factor that possibly regulate vista374[chr1:12050736-12051137]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 12050742 12050757 RFX5 JASPAR yes 118230880
chr1 12050748 12050752 LFA1 TRANSFAC yes 118230881
chr1 12050760 12050763 MYB TRANSFAC yes 118230882
chr1 12050764 12050768 LFA1 TRANSFAC yes 118230883
chr1 12050771 12050774 MYB TRANSFAC yes 118230884
chr1 12050790 12050808 IRF2 JASPAR yes 118230885
chr1 12050791 12050812 IRF1 JASPAR yes 118230886
chr1 12050799 12050813 TCF7L2 JASPAR yes 118230887
chr1 12050805 12050813 ISL2 JASPAR yes 118230888
chr1 12050813 12050824 USF1 JASPAR yes 118230889
chr1 12050813 12050824 USF2 JASPAR yes 118230890
chr1 12050814 12050824 TFEB JASPAR yes 118230891
chr1 12050814 12050824 TFEC JASPAR yes 118230892
chr1 12050831 12050842 FLI1 JASPAR yes 118230893
chr1 12050844 12050854 NFKB1 JASPAR yes 118230894
chr1 12050844 12050854 RELA JASPAR yes 118230895
chr1 12050844 12050854 REL JASPAR yes 118230896
chr1 12050844 12050855 NFKB1 JASPAR yes 118230897
chr1 12050846 12050856 TEAD1 JASPAR yes 118230898
chr1 12050846 12050856 TEAD4 JASPAR yes 118230899
chr1 12050846 12050858 TEAD1 JASPAR yes 118230900
chr1 12050847 12050855 TEAD3 JASPAR yes 118230901
chr1 12050847 12050862 HNF4G JASPAR yes 118230902
chr1 12050848 12050862 NR2F1 JASPAR yes 118230903
chr1 12050848 12050863 HNF4A JASPAR yes 118230904
chr1 12050858 12050877 PAX5 JASPAR yes 118230905
chr1 12050861 12050870 HIC2 JASPAR yes 118230906
chr1 12050864 12050874 ID4 JASPAR yes 118230907
chr1 12050864 12050874 TCF4 JASPAR yes 118230908
chr1 12050868 12050886 SRF JASPAR yes 118230909
chr1 12050870 12050886 SRF JASPAR yes 118230910
chr1 12050870 12050888 SRF JASPAR yes 118230911
chr1 12050871 12050883 SRF JASPAR yes 118230912
chr1 12050873 12050885 SRF JASPAR yes 118230913
chr1 12050876 12050880 TEAD2 TRANSFAC yes 118230914
chr1 12050882 12050888 PEA3 TRANSFAC yes 118230915
chr1 12050900 12050915 NR2C2 JASPAR yes 118230916
chr1 12050901 12050915 RXRB JASPAR yes 118230917
chr1 12050901 12050915 RXRG JASPAR yes 118230918
chr1 12050903 12050907 LFA1 TRANSFAC yes 118230919
chr1 12050922 12050937 ZIC3 JASPAR yes 118230920
chr1 12050924 12050935 E2F1 JASPAR yes 118230921
chr1 12050925 12050936 E2F4 JASPAR yes 118230922
chr1 12050925 12050936 E2F6 JASPAR yes 118230923
chr1 12050929 12050935 MAZ TRANSFAC yes 118230924
chr1 12050930 12050940 MZF1 JASPAR yes 118230925
chr1 12050938 12050948 GCM2 JASPAR yes 118230926
chr1 12050939 12050949 ZNF740 JASPAR yes 118230927
chr1 12050942 12050960 ESR1 JASPAR yes 118230928
chr1 12050948 12050956 FOXO3 JASPAR yes 118230929
chr1 12050958 12050962 ESR1 TRANSFAC yes 118230930
chr1 12050960 12050971 FLI1 JASPAR yes 118230931
chr1 12050961 12050965 YY1 TRANSFAC yes 118230932
chr1 12050962 12050970 FEV JASPAR yes 118230933
chr1 12050963 12050981 SRF JASPAR yes 118230934
chr1 12050964 12050969 ETS2 TRANSFAC yes 118230935
chr1 12050964 12050978 TCF7L2 JASPAR yes 118230936
chr1 12050989 12050999 RELA JASPAR yes 118230937
chr1 12051000 12051004 LFA1 TRANSFAC yes 118230938
chr1 12051011 12051028 PAX1 JASPAR yes 118230939
chr1 12051011 12051028 PAX9 JASPAR yes 118230940
chr1 12051049 12051054 SP1 TRANSFAC yes 118230941
chr1 12051054 12051058 NFE TRANSFAC yes 118230942
chr1 12051071 12051083 TEAD1 JASPAR yes 118230943
chr1 12051072 12051091 REST JASPAR yes 118230944
chr1 12051090 12051098 FOXO3 JASPAR yes 118230945
chr1 12051122 12051132 ID4 JASPAR yes 118230946
chr1 12051122 12051132 TCF3 JASPAR yes 118230947
chr1 12051122 12051132 TCF4 JASPAR yes 118230948
chr1 12051123 12051132 SNAI2 JASPAR yes 118230949
chr1 12051124 12051129 USF2 TRANSFAC yes 118230950
chr1 12051127 12051131 NFE TRANSFAC yes 118230951
SNP sites on vista374[chr1:12050736-12051137]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 12050929 rs76082796 C A,T
E2F1 E2F4 E2F6 MAZ ZIC3
82562
chr1 12050948 rs535563052 G A
ESR1 FOXO3 GCM2 ZNF740
82563
chr1 12050986 rs115932092 T C no 82564
chr1 12050997 rs114195208 C T
RELA
82565
chr1 12051065 rs539250429 C T no 82566
chr1 12051128 rs566381607 C T
ID4 NFE SNAI2 TCF3 TCF4 USF2
82567
Genes possibly regulated by vista374[chr1:12050736-12051137]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 11979648 11986485 - KIAA2013 ENSG00000116685.11 11986485 0.57 1.0 162 35749
chr1 11994262 12035595 + PLOD1 ENSG00000083444.12 11994262 0.7 1.0 163 43526
chr1 12040238 12073571 + MFN2 ENSG00000116688.12 12040238 0.73 1.0 164 89502
chr1 12079523 12092102 + MIIP ENSG00000116691.6 12079523 0.73 1.0 165 71614
chr1 12123434 12204264 + TNFRSF8 ENSG00000120949.10 12123434 0.99 0.98 166 27703
Expression level of Genes
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miRNAs possibly regulated by vista374[chr1:12050736-12051137]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 12089259 12089279 + hsa-miR-6729-3p MIMAT0027360 12079557 0.004545215239632873 0.0 0.0 14
Expression level of miRNAs
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