EnhancerDB
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  3. vista3749[chr1:167397572-167397954]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3749[chr1:167397572-167397954]
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Tissue distribution of vista3749
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Transcription factor that possibly regulate vista3749[chr1:167397572-167397954]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 167397595 167397601 SOX10 JASPAR yes 118391980
chr1 167397605 167397616 TBX20 JASPAR yes 118391981
chr1 167397606 167397617 HOXC12 JASPAR yes 118391982
chr1 167397610 167397622 HNF1B JASPAR yes 118391983
chr1 167397619 167397622 MYB TRANSFAC yes 118391984
chr1 167397624 167397628 YY1 TRANSFAC yes 118391985
chr1 167397641 167397647 SOX10 JASPAR yes 118391986
chr1 167397661 167397672 FLI1 JASPAR yes 118391987
chr1 167397662 167397669 PEA3 TRANSFAC yes 118391988
chr1 167397668 167397682 POU4F1 JASPAR yes 118391989
chr1 167397668 167397684 POU4F2 JASPAR yes 118391990
chr1 167397668 167397684 POU4F3 JASPAR yes 118391991
chr1 167397674 167397684 NEUROG2 JASPAR yes 118391992
chr1 167397689 167397701 IRF1 JASPAR yes 118391993
chr1 167397689 167397703 IRF7 JASPAR yes 118391994
chr1 167397691 167397697 TCF4 TRANSFAC yes 118391995
chr1 167397712 167397731 REST JASPAR yes 118391996
chr1 167397739 167397742 MYB TRANSFAC yes 118391997
chr1 167397740 167397751 ETV2 JASPAR yes 118391998
chr1 167397741 167397751 ERF JASPAR yes 118391999
chr1 167397741 167397751 ERG JASPAR yes 118392000
chr1 167397741 167397751 ETS1 JASPAR yes 118392001
chr1 167397741 167397751 FLI1 JASPAR yes 118392002
chr1 167397742 167397750 FEV JASPAR yes 118392003
chr1 167397792 167397805 SCRT2 JASPAR yes 118392004
chr1 167397817 167397837 RREB1 JASPAR yes 118392005
chr1 167397822 167397842 RREB1 JASPAR yes 118392006
chr1 167397827 167397833 HiNF-A TRANSFAC yes 118392007
chr1 167397838 167397853 MEF2A JASPAR yes 118392008
chr1 167397858 167397873 RUNX2 JASPAR yes 118392009
chr1 167397868 167397876 FOXO3 JASPAR yes 118392010
chr1 167397872 167397882 MYF6 JASPAR yes 118392011
chr1 167397874 167397879 MYC TRANSFAC yes 118392012
chr1 167397877 167397891 TLX1 JASPAR yes 118392013
chr1 167397878 167397892 TLX1 JASPAR yes 118392014
chr1 167397902 167397915 ELF1 JASPAR yes 118392015
chr1 167397903 167397915 EHF JASPAR yes 118392016
chr1 167397903 167397915 ELF1 JASPAR yes 118392017
chr1 167397903 167397915 ELF4 JASPAR yes 118392018
chr1 167397903 167397916 ELF3 JASPAR yes 118392019
chr1 167397904 167397915 ELF5 JASPAR yes 118392020
chr1 167397905 167397914 ELK4 JASPAR yes 118392021
chr1 167397905 167397915 ELK1 JASPAR yes 118392022
chr1 167397905 167397915 ELK3 JASPAR yes 118392023
chr1 167397905 167397915 ETS1 JASPAR yes 118392024
chr1 167397905 167397915 ETV1 JASPAR yes 118392025
chr1 167397905 167397915 ETV3 JASPAR yes 118392026
chr1 167397905 167397915 ETV4 JASPAR yes 118392027
chr1 167397905 167397915 ETV5 JASPAR yes 118392028
chr1 167397905 167397915 ETV6 JASPAR yes 118392029
chr1 167397905 167397915 FEV JASPAR yes 118392030
chr1 167397905 167397915 GABPA JASPAR yes 118392031
chr1 167397905 167397916 ELK4 JASPAR yes 118392032
chr1 167397906 167397914 FEV JASPAR yes 118392033
chr1 167397907 167397913 ETS1 JASPAR yes 118392034
chr1 167397907 167397913 SPI1 JASPAR yes 118392035
chr1 167397925 167397939 RORA JASPAR yes 118392036
chr1 167397928 167397938 RORA JASPAR yes 118392037
chr1 167397933 167397937 ESR1 TRANSFAC yes 118392038
chr1 167397938 167397950 YY1 JASPAR yes 118392039
chr1 167397943 167397947 YY1 TRANSFAC yes 118392040
SNP sites on vista3749[chr1:167397572-167397954]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 167397609 rs570577912 T C
HOXC12 TBX20
701653
chr1 167397693 rs114423770 T C
IRF1 IRF7 TCF4
701654
chr1 167397729 rs78387553 C A,G
REST
701655
chr1 167397798 rs186251148 A G
SCRT2
701656
Genes possibly regulated by vista3749[chr1:167397572-167397954]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 167399877 167487847 - CD247 ENSG00000198821.6 167487847 0.97 0.97 1530 10107
Expression level of Genes
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miRNAs possibly regulated by vista3749[chr1:167397572-167397954]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results