EnhancerDB
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  3. vista375[chr1:12100563-12100930]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista375[chr1:12100563-12100930]
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Tissue distribution of vista375
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Transcription factor that possibly regulate vista375[chr1:12100563-12100930]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 12100556 12100568 NHLH1 JASPAR yes 26795581
chr1 12100556 12100568 NHLH1 JASPAR yes 118230952
chr1 12100557 12100567 NHLH1 JASPAR yes 26795582
chr1 12100557 12100567 TFAP4 JASPAR yes 26795583
chr1 12100557 12100567 NHLH1 JASPAR yes 118230953
chr1 12100557 12100567 TFAP4 JASPAR yes 118230954
chr1 12100564 12100579 HSF1 JASPAR yes 26795584
chr1 12100564 12100579 HSF1 JASPAR yes 118230955
chr1 12100565 12100578 HSF4 JASPAR yes 26795585
chr1 12100565 12100578 HSF4 JASPAR yes 118230956
chr1 12100570 12100585 STAT2 JASPAR yes 26795586
chr1 12100570 12100585 STAT2 JASPAR yes 118230957
chr1 12100571 12100585 STAT1 JASPAR yes 26795587
chr1 12100571 12100585 STAT1 JASPAR yes 118230958
chr1 12100577 12100591 RXRB JASPAR yes 26795588
chr1 12100577 12100591 RXRG JASPAR yes 26795589
chr1 12100577 12100591 RXRB JASPAR yes 118230959
chr1 12100577 12100591 RXRG JASPAR yes 118230960
chr1 12100585 12100602 RXRA JASPAR yes 26795590
chr1 12100585 12100602 RXRA JASPAR yes 118230961
chr1 12100593 12100602 SNAI2 JASPAR yes 26795591
chr1 12100593 12100602 SNAI2 JASPAR yes 118230962
chr1 12100593 12100603 FIGLA JASPAR yes 26795592
chr1 12100593 12100603 TCF3 JASPAR yes 26795593
chr1 12100593 12100603 FIGLA JASPAR yes 118230963
chr1 12100593 12100603 TCF3 JASPAR yes 118230964
chr1 12100647 12100660 ZBTB18 JASPAR yes 26795594
chr1 12100647 12100660 ZBTB18 JASPAR yes 118230965
chr1 12100660 12100671 BATF JASPAR yes 26795595
chr1 12100660 12100671 BATF JASPAR yes 118230966
chr1 12100672 12100685 ZBTB18 JASPAR yes 26795596
chr1 12100672 12100685 ZBTB18 JASPAR yes 118230967
chr1 12100682 12100696 ONECUT1 JASPAR yes 26795597
chr1 12100682 12100696 ONECUT1 JASPAR yes 118230968
chr1 12100708 12100711 MYB TRANSFAC yes 26795598
chr1 12100708 12100711 MYB TRANSFAC yes 118230969
chr1 12100713 12100725 TAL1 JASPAR yes 26795599
chr1 12100713 12100725 TAL1 JASPAR yes 118230970
chr1 12100715 12100725 OLIG1 JASPAR yes 26795600
chr1 12100715 12100725 OLIG3 JASPAR yes 26795601
chr1 12100715 12100725 OLIG1 JASPAR yes 118230971
chr1 12100715 12100725 OLIG3 JASPAR yes 118230972
chr1 12100715 12100727 TAL1 JASPAR yes 26795602
chr1 12100715 12100727 TAL1 JASPAR yes 118230973
chr1 12100723 12100728 GATA1 TRANSFAC yes 26795603
chr1 12100723 12100728 GATA1 TRANSFAC yes 118230974
chr1 12100747 12100759 INSM1 JASPAR yes 26795604
chr1 12100747 12100759 INSM1 JASPAR yes 118230975
chr1 12100752 12100757 SP1 TRANSFAC yes 26795605
chr1 12100752 12100757 SP1 TRANSFAC yes 118230976
chr1 12100757 12100761 YY1 TRANSFAC yes 26795606
chr1 12100757 12100761 YY1 TRANSFAC yes 118230977
chr1 12100765 12100776 STAT1 JASPAR yes 26795607
chr1 12100765 12100776 STAT1 JASPAR yes 118230978
chr1 12100769 12100774 ETS2 TRANSFAC yes 26795608
chr1 12100769 12100774 ETS2 TRANSFAC yes 118230979
chr1 12100774 12100788 JUN JASPAR yes 26795609
chr1 12100774 12100788 JUN JASPAR yes 118230980
chr1 12100777 12100788 FOSL2 JASPAR yes 26795610
chr1 12100777 12100788 JUNB JASPAR yes 26795611
chr1 12100777 12100788 FOSL2 JASPAR yes 118230981
chr1 12100777 12100788 JUNB JASPAR yes 118230982
chr1 12100778 12100789 FOS JASPAR yes 26795612
chr1 12100778 12100789 FOSL1 JASPAR yes 26795613
chr1 12100778 12100789 JUND JASPAR yes 26795614
chr1 12100778 12100789 NFE2 JASPAR yes 26795615
chr1 12100778 12100789 FOS JASPAR yes 118230983
chr1 12100778 12100789 FOSL1 JASPAR yes 118230984
chr1 12100778 12100789 JUND JASPAR yes 118230985
chr1 12100778 12100789 NFE2 JASPAR yes 118230986
chr1 12100779 12100786 JUN TRANSFAC yes 26795616
chr1 12100779 12100786 JUN TRANSFAC yes 118230987
chr1 12100779 12100788 JDP2 JASPAR yes 26795617
chr1 12100779 12100788 JDP2 JASPAR yes 118230988
chr1 12100779 12100790 FOSL2 JASPAR yes 26795618
chr1 12100779 12100790 JUNB JASPAR yes 26795619
chr1 12100779 12100790 FOSL2 JASPAR yes 118230989
chr1 12100779 12100790 JUNB JASPAR yes 118230990
chr1 12100816 12100830 TCF7L2 JASPAR yes 26795620
chr1 12100816 12100830 TCF7L2 JASPAR yes 118230991
chr1 12100820 12100826 TCF1 TRANSFAC yes 26795621
chr1 12100820 12100826 TCF1 TRANSFAC yes 118230992
chr1 12100820 12100827 TCF4 TRANSFAC yes 26795622
chr1 12100820 12100827 TCF4 TRANSFAC yes 118230993
chr1 12100827 12100846 REST JASPAR yes 26795623
chr1 12100827 12100846 REST JASPAR yes 118230994
chr1 12100830 12100841 EBF1 JASPAR yes 26795624
chr1 12100830 12100841 EBF1 JASPAR yes 118230995
chr1 12100849 12100863 TLX1 JASPAR yes 26795625
chr1 12100849 12100863 TLX1 JASPAR yes 118230996
chr1 12100850 12100864 TLX1 JASPAR yes 26795626
chr1 12100850 12100864 TLX1 JASPAR yes 118230997
chr1 12100870 12100881 FOXH1 JASPAR yes 26795627
chr1 12100870 12100881 FOXH1 JASPAR yes 118230998
chr1 12100872 12100891 PAX5 JASPAR yes 26795628
chr1 12100872 12100891 PAX5 JASPAR yes 118230999
chr1 12100874 12100880 ZNF354C JASPAR yes 26795629
chr1 12100874 12100880 ZNF354C JASPAR yes 118231000
chr1 12100877 12100891 PAX6 JASPAR yes 26795630
chr1 12100877 12100891 PAX6 JASPAR yes 118231001
chr1 12100886 12100892 HiNF-A TRANSFAC yes 26795631
chr1 12100886 12100892 HiNF-A TRANSFAC yes 118231002
chr1 12100890 12100901 FOXA1 JASPAR yes 26795632
chr1 12100890 12100901 FOXA1 JASPAR yes 118231003
chr1 12100890 12100905 FOXA1 JASPAR yes 26795633
chr1 12100890 12100905 FOXA1 JASPAR yes 118231004
chr1 12100891 12100903 FOXC2 JASPAR yes 26795634
chr1 12100891 12100903 FOXC2 JASPAR yes 118231005
chr1 12100899 12100911 PROX1 JASPAR yes 26795635
chr1 12100899 12100911 PROX1 JASPAR yes 118231006
chr1 12100901 12100904 MYB TRANSFAC yes 26795636
chr1 12100901 12100904 MYB TRANSFAC yes 118231007
chr1 12100911 12100915 YY1 TRANSFAC yes 26795637
chr1 12100911 12100915 YY1 TRANSFAC yes 118231008
SNP sites on vista375[chr1:12100563-12100930]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 12100661 rs78207116 T C
BATF
83126
chr1 12100673 rs146168636 G A
ZBTB18
83127
chr1 12100674 rs78608712 C T
ZBTB18
83128
chr1 12100695 rs139103191 G C
ONECUT1
83129
chr1 12100712 rs12024126 C T no 83130
chr1 12100778 rs142656357 T A
FOS FOSL1 FOSL2 JUN JUNB JUND NFE2
83131
Genes possibly regulated by vista375[chr1:12100563-12100930]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 12040238 12073571 + MFN2 ENSG00000116688.12 12040238 0.73 1.0 164 39675
chr1 12079523 12092102 + MIIP ENSG00000116691.6 12079523 0.73 1.0 165 78960
chr1 12123434 12204264 + TNFRSF8 ENSG00000120949.10 12123434 0.99 0.98 166 77496
Expression level of Genes
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miRNAs possibly regulated by vista375[chr1:12100563-12100930]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 12089259 12089279 + hsa-miR-6729-3p MIMAT0027360 12079557 0.006074536200952225 0.0 0.0 14
Expression level of miRNAs
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