EnhancerDB
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  3. vista378[chr1:12124472-12125118]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista378[chr1:12124472-12125118]
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Tissue distribution of vista378
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Transcription factor that possibly regulate vista378[chr1:12124472-12125118]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 12123008 12124989 POLR2A UCSC Txn Factor no Conserved 107802091
chr1 12124476 12124488 TFAP2C JASPAR yes 118231108
chr1 12124476 12124491 TFAP2A JASPAR yes 118231109
chr1 12124476 12124491 TFAP2C JASPAR yes 118231110
chr1 12124499 12124516 RARA JASPAR yes 118231111
chr1 12124504 12124514 TFAP4 JASPAR yes 118231112
chr1 12124550 12124558 TBX15 JASPAR yes 118231113
chr1 12124550 12124558 TBX4 JASPAR yes 118231114
chr1 12124558 12124564 ZNF354C JASPAR yes 118231115
chr1 12124571 12124592 ZNF263 JASPAR yes 118231116
chr1 12124572 12124583 DMRT3 JASPAR yes 118231117
chr1 12124578 12124593 PRDM1 JASPAR yes 118231118
chr1 12124587 12124592 ETS2 TRANSFAC yes 118231119
chr1 12124587 12124595 EHF JASPAR yes 118231120
chr1 12124614 12124619 SP1 TRANSFAC yes 118231121
chr1 12124616 12124622 ESR1 TRANSFAC yes 118231122
chr1 12124617 12124638 ZNF263 JASPAR yes 118231123
chr1 12124618 12124622 ESR1 TRANSFAC yes 118231124
chr1 12124624 12124629 SP1 TRANSFAC yes 118231125
chr1 12124625 12124639 PLAG1 JASPAR yes 118231126
chr1 12124631 12124642 E2F6 JASPAR yes 118231127
chr1 12124635 12124640 ETS2 TRANSFAC yes 118231128
chr1 12124644 12124658 SPI1 JASPAR yes 118231129
chr1 12124648 12124663 LEF1 JASPAR yes 118231130
chr1 12124653 12124663 GSC2 JASPAR yes 118231131
chr1 12124654 12124662 OTX1 JASPAR yes 118231132
chr1 12124654 12124662 OTX2 JASPAR yes 118231133
chr1 12124659 12124672 ELF1 JASPAR yes 118231134
chr1 12124662 12124672 GABPA JASPAR yes 118231135
chr1 12124662 12124673 FLI1 JASPAR yes 118231136
chr1 12124705 12124719 NR2F1 JASPAR yes 118231137
chr1 12124718 12124728 SP1 JASPAR yes 118231138
chr1 12124721 12124742 ZNF263 JASPAR yes 118231139
chr1 12124750 12124761 E2F6 JASPAR yes 118231140
chr1 12124755 12124761 PEA3 TRANSFAC yes 118231141
chr1 12124770 12124784 SPI1 JASPAR yes 118231142
chr1 12124774 12124780 PEA3 TRANSFAC yes 118231143
chr1 12124794 12124798 YY1 TRANSFAC yes 118231144
chr1 12124799 12124803 H1TF2 TRANSFAC yes 118231145
chr1 12124799 12124803 NFE TRANSFAC yes 118231146
chr1 12124799 12124803 SRF TRANSFAC yes 118231147
chr1 12124804 12124808 LFA1 TRANSFAC yes 118231148
chr1 12124813 12124826 NFKB2 JASPAR yes 118231149
chr1 12124815 12124825 REL JASPAR yes 118231150
chr1 12124820 12124834 PLAG1 JASPAR yes 118231151
chr1 12124821 12124835 PLAG1 JASPAR yes 118231152
chr1 12124821 12124836 NR2C2 JASPAR yes 118231153
chr1 12124823 12124833 SP1 JASPAR yes 118231154
chr1 12124825 12124839 E2F7 JASPAR yes 118231155
chr1 12124826 12124838 E2F8 JASPAR yes 118231156
chr1 12124828 12124847 CTCF JASPAR yes 118231157
chr1 12124836 12124851 NR2C2 JASPAR yes 118231158
chr1 12124837 12124851 PLAG1 JASPAR yes 118231159
chr1 12124839 12124843 LFA1 TRANSFAC yes 118231160
chr1 12124845 12124860 ESR2 JASPAR yes 118231161
chr1 12124845 12124860 HNF4G JASPAR yes 118231162
chr1 12124846 12124861 HNF4A JASPAR yes 118231163
chr1 12124850 12124856 SOX10 JASPAR yes 118231164
chr1 12124858 12124876 ESR1 JASPAR yes 118231165
chr1 12124860 12124880 ESR1 JASPAR yes 118231166
chr1 12124864 12124881 NR3C1 JASPAR yes 118231167
chr1 12124864 12124881 NR3C2 JASPAR yes 118231168
chr1 12124864 12124882 ESR2 JASPAR yes 118231169
chr1 12124873 12124877 NFE TRANSFAC yes 118231170
chr1 12124886 12124901 TP53 JASPAR yes 118231171
chr1 12124892 12124901 ZEB1 JASPAR yes 118231172
chr1 12124895 12124900 USF2 TRANSFAC yes 118231173
chr1 12124902 12124907 ETS2 TRANSFAC yes 118231174
chr1 12124920 12124929 NFIX JASPAR yes 118231175
chr1 12124920 12124930 NFIA JASPAR yes 118231176
chr1 12124922 12124928 NFIC JASPAR yes 118231177
chr1 12124933 12124938 TFAP2A TRANSFAC yes 118231178
chr1 12124933 12124939 MZF1 JASPAR yes 118231179
chr1 12124933 12124954 ZNF263 JASPAR yes 118231180
chr1 12124935 12124956 ZNF263 JASPAR yes 118231181
chr1 12124936 12124951 LEF1 JASPAR yes 118231182
chr1 12124936 12124957 ZNF263 JASPAR yes 118231183
chr1 12124938 12124959 ZNF263 JASPAR yes 118231184
chr1 12124939 12124960 ZNF263 JASPAR yes 118231185
chr1 12124943 12124964 ZNF263 JASPAR yes 118231186
chr1 12124944 12124965 ZNF263 JASPAR yes 118231187
chr1 12124945 12124950 ETS2 TRANSFAC yes 118231188
chr1 12124947 12124968 ZNF263 JASPAR yes 118231189
chr1 12124948 12124953 ETS2 TRANSFAC yes 118231190
chr1 12124974 12124994 RREB1 JASPAR yes 118231191
chr1 12124978 12124984 TCF4 TRANSFAC yes 118231192
chr1 12124993 12124999 NFIC JASPAR yes 118231193
chr1 12125006 12125016 TFEC JASPAR yes 118231194
chr1 12125015 12125020 ETS2 TRANSFAC yes 118231195
chr1 12125029 12125039 NFKB1 JASPAR yes 118231196
chr1 12125035 12125045 ZNF740 JASPAR yes 118231197
chr1 12125036 12125042 SP1 TRANSFAC yes 118231198
chr1 12125047 12125057 HOXA13 JASPAR yes 118231199
chr1 12125101 12125104 MYB TRANSFAC yes 118231200
SNP sites on vista378[chr1:12124472-12125118]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 12124505 rs11569792 C T
POLR2A RARA TFAP4
83454
chr1 12124527 rs185866852 T C
POLR2A
83455
chr1 12124543 rs11569793 ACCATAGTAGGTG A
POLR2A
83456
chr1 12124543 rs141500947 ACCATAGTAGGTG A
POLR2A
83457
chr1 12124601 rs11569794 G A
POLR2A
83458
chr1 12124835 rs141823782 C A,G,T
CTCF E2F7 E2F8 NR2C2 PLAG1 POLR2A
83459
chr1 12125006 rs11569795 G A
TFEC
83460
Genes possibly regulated by vista378[chr1:12124472-12125118]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 12040238 12073571 + MFN2 ENSG00000116688.12 12040238 0.73 1.0 164 15766
chr1 12079523 12092102 + MIIP ENSG00000116691.6 12079523 0.73 1.0 165 55051
chr1 12123434 12204264 + TNFRSF8 ENSG00000120949.10 12123434 0.99 0.98 166 98962
Expression level of Genes
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miRNAs possibly regulated by vista378[chr1:12124472-12125118]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results