EnhancerDB
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  3. vista3789[chr1:167730247-167730494]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3789[chr1:167730247-167730494]
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Tissue distribution of vista3789
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Transcription factor that possibly regulate vista3789[chr1:167730247-167730494]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 167730246 167730252 TCF1 TRANSFAC yes 32891943
chr1 167730246 167730252 TCF1 TRANSFAC yes 118394425
chr1 167730258 167730264 GATA3 JASPAR yes 32891944
chr1 167730258 167730264 GATA3 JASPAR yes 118394426
chr1 167730263 167730267 LFA1 TRANSFAC yes 32891945
chr1 167730263 167730267 LFA1 TRANSFAC yes 118394427
chr1 167730286 167730298 HNF1B JASPAR yes 32891946
chr1 167730286 167730298 HNF1B JASPAR yes 118394428
chr1 167730288 167730291 MYB TRANSFAC yes 32891947
chr1 167730288 167730291 MYB TRANSFAC yes 118394429
chr1 167730293 167730303 RORA JASPAR yes 32891948
chr1 167730293 167730303 RORA JASPAR yes 118394430
chr1 167730298 167730302 ESR1 TRANSFAC yes 32891949
chr1 167730298 167730302 ESR1 TRANSFAC yes 118394431
chr1 167730304 167730314 TEAD1 JASPAR yes 32891950
chr1 167730304 167730314 TEAD4 JASPAR yes 32891951
chr1 167730304 167730314 TEAD1 JASPAR yes 118394432
chr1 167730304 167730314 TEAD4 JASPAR yes 118394433
chr1 167730305 167730313 TEAD3 JASPAR yes 32891952
chr1 167730305 167730313 TEAD3 JASPAR yes 118394434
chr1 167730308 167730313 ETS2 TRANSFAC yes 32891953
chr1 167730308 167730313 ETS2 TRANSFAC yes 118394435
chr1 167730313 167730316 MYB TRANSFAC yes 32891954
chr1 167730313 167730316 MYB TRANSFAC yes 118394436
chr1 167730336 167730339 MYB TRANSFAC yes 32891955
chr1 167730336 167730339 MYB TRANSFAC yes 118394437
chr1 167730340 167730354 TCF7L2 JASPAR yes 32891956
chr1 167730340 167730354 TCF7L2 JASPAR yes 118394438
chr1 167730340 167730355 LEF1 JASPAR yes 32891957
chr1 167730340 167730355 LEF1 JASPAR yes 118394439
chr1 167730344 167730350 TCF4 TRANSFAC yes 32891958
chr1 167730344 167730350 TCF4 TRANSFAC yes 118394440
chr1 167730354 167730365 PHOX2A JASPAR yes 32891959
chr1 167730354 167730365 PHOX2A JASPAR yes 118394441
chr1 167730364 167730369 GATA2 JASPAR yes 32891960
chr1 167730364 167730369 GATA2 JASPAR yes 118394442
chr1 167730403 167730420 NR3C2 JASPAR yes 32891961
chr1 167730403 167730420 NR3C2 JASPAR yes 118394443
chr1 167730405 167730420 AR JASPAR yes 32891962
chr1 167730405 167730420 AR JASPAR yes 118394444
chr1 167730414 167730428 TCF7L2 JASPAR yes 32891963
chr1 167730414 167730428 TCF7L2 JASPAR yes 118394445
chr1 167730421 167730433 PBX1 JASPAR yes 32891964
chr1 167730421 167730433 PBX1 JASPAR yes 118394446
chr1 167730444 167730450 SOX10 JASPAR yes 32891965
chr1 167730444 167730450 SOX10 JASPAR yes 118394447
chr1 167730449 167730454 SP1 TRANSFAC yes 32891966
chr1 167730449 167730454 SP1 TRANSFAC yes 118394448
chr1 167730473 167730487 RXRB JASPAR yes 32891967
chr1 167730473 167730487 RXRG JASPAR yes 32891968
chr1 167730473 167730487 RXRB JASPAR yes 118394449
chr1 167730473 167730487 RXRG JASPAR yes 118394450
chr1 167730475 167730479 ESR1 TRANSFAC yes 32891969
chr1 167730475 167730479 ESR1 TRANSFAC yes 118394451
chr1 167730479 167730494 STAT2 JASPAR yes 32891970
chr1 167730479 167730494 STAT2 JASPAR yes 118394452
SNP sites on vista3789[chr1:167730247-167730494]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 167730345 rs61808925 A G
LEF1 TCF4 TCF7L2
705331
chr1 167730362 rs7416490 A G
PHOX2A
705332
chr1 167730406 rs187385298 G A
AR NR3C2
705333
chr1 167730428 rs192169818 T A
PBX1 TCF7L2
705334
chr1 167730443 rs540129011 G A no 705335
Genes possibly regulated by vista3789[chr1:167730247-167730494]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 167690429 167761156 + MPZL1 ENSG00000197965.7 167690429 0.66 0.99 1533 60182
Expression level of Genes
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miRNAs possibly regulated by vista3789[chr1:167730247-167730494]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results