EnhancerDB
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  3. vista3796[chr1:168149052-168149361]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3796[chr1:168149052-168149361]
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Tissue distribution of vista3796
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Transcription factor that possibly regulate vista3796[chr1:168149052-168149361]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 168149109 168149341 EBF1 UCSC Txn Factor no Conserved 107844546
chr1 168149118 168149132 PLAG1 JASPAR yes 118394774
chr1 168149123 168149144 IRF1 JASPAR yes 118394775
chr1 168149127 168149142 PRDM1 JASPAR yes 118394776
chr1 168149127 168149145 IRF2 JASPAR yes 118394777
chr1 168149133 168149145 PKNOX1 JASPAR yes 118394778
chr1 168149133 168149145 TGIF1 JASPAR yes 118394779
chr1 168149133 168149145 TGIF2 JASPAR yes 118394780
chr1 168149141 168149155 MTF1 JASPAR yes 118394781
chr1 168149153 168149163 MSC JASPAR yes 118394782
chr1 168149170 168149175 NFY TRANSFAC yes 118394783
chr1 168149215 168149230 TFAP2A JASPAR yes 118394784
chr1 168149215 168149230 TFAP2C JASPAR yes 118394785
chr1 168149218 168149229 EBF1 JASPAR yes 118394786
chr1 168149218 168149230 TFAP2A JASPAR yes 118394787
chr1 168149218 168149230 TFAP2B JASPAR yes 118394788
chr1 168149218 168149230 TFAP2C JASPAR yes 118394789
chr1 168149218 168149232 EBF1 JASPAR yes 118394790
chr1 168149219 168149228 TFAP2A JASPAR yes 118394791
chr1 168149220 168149231 EBF1 JASPAR yes 118394792
chr1 168149262 168149274 PROX1 JASPAR yes 118394793
chr1 168149268 168149280 IRF1 JASPAR yes 118394794
chr1 168149272 168149286 GATA2 JASPAR yes 118394795
chr1 168149276 168149284 GATA3 JASPAR yes 118394796
chr1 168149305 168149310 GATA2 JASPAR yes 118394797
chr1 168149320 168149324 YY1 TRANSFAC yes 118394798
chr1 168149344 168149349 H4TF1 TRANSFAC yes 118394799
chr1 168149348 168149359 EBF1 JASPAR yes 118394800
SNP sites on vista3796[chr1:168149052-168149361]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 168149142 rs4657741 G A
EBF1 IRF1 IRF2 MTF1 PKNOX1 PRDM1 TGIF1 TGIF2
707054
chr1 168149190 rs560488644 A G
EBF1
707055
chr1 168149316 rs369658119 A G
EBF1
707056
Genes possibly regulated by vista3796[chr1:168149052-168149361]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 168053997 168106821 - GPR161 ENSG00000143147.10 168106821 0.87 1.0 1537 57769
chr1 168148171 168169950 + TIPRL ENSG00000143155.8 168148171 0.57 0.99 1538 99119
chr1 168195176 168222263 + SFT2D2 ENSG00000213064.5 168195176 0.68 0.99 1539 54185
Expression level of Genes
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miRNAs possibly regulated by vista3796[chr1:168149052-168149361]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results