EnhancerDB
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  3. vista3799[chr1:168311962-168312260]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3799[chr1:168311962-168312260]
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Tissue distribution of vista3799
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Transcription factor that possibly regulate vista3799[chr1:168311962-168312260]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 168311922 168312283 CTCF UCSC Txn Factor no Conserved 107844591
chr1 168311932 168312178 EGR1 UCSC Txn Factor no Conserved 107844594
chr1 168311976 168312258 SMC3 UCSC Txn Factor no Conserved 107844610
chr1 168311983 168312247 RAD21 UCSC Txn Factor no Conserved 107844616
chr1 168311958 168311970 TFAP2B JASPAR yes 32915504
chr1 168311958 168311970 TFAP2C JASPAR yes 32915505
chr1 168311958 168311970 TFAP2B JASPAR yes 118394878
chr1 168311958 168311970 TFAP2C JASPAR yes 118394879
chr1 168311966 168311981 RUNX2 JASPAR yes 32915506
chr1 168311966 168311981 RUNX2 JASPAR yes 118394880
chr1 168311970 168311980 RUNX3 JASPAR yes 32915507
chr1 168311970 168311980 RUNX3 JASPAR yes 118394881
chr1 168311977 168311991 RORA JASPAR yes 32915508
chr1 168311977 168311991 RORA JASPAR yes 118394882
chr1 168311978 168311988 RORA JASPAR yes 32915509
chr1 168311978 168311988 RORA JASPAR yes 118394883
chr1 168312006 168312016 RORA JASPAR yes 32915510
chr1 168312006 168312016 RORA JASPAR yes 118394884
chr1 168312011 168312026 HNF4A JASPAR yes 32915511
chr1 168312011 168312026 HNF4A JASPAR yes 118394885
chr1 168312032 168312037 SP1 TRANSFAC yes 32915512
chr1 168312032 168312037 SP1 TRANSFAC yes 118394886
chr1 168312033 168312044 TFAP2A JASPAR yes 32915513
chr1 168312033 168312044 TFAP2B JASPAR yes 32915514
chr1 168312033 168312044 TFAP2A JASPAR yes 118394887
chr1 168312033 168312044 TFAP2B JASPAR yes 118394888
chr1 168312073 168312081 GATA3 JASPAR yes 32915515
chr1 168312073 168312081 GATA3 JASPAR yes 118394889
chr1 168312088 168312094 ATF1 TRANSFAC yes 32915516
chr1 168312088 168312094 ATF1 TRANSFAC yes 118394890
chr1 168312088 168312095 XBP1 TRANSFAC yes 32915517
chr1 168312088 168312095 XBP1 TRANSFAC yes 118394891
chr1 168312088 168312100 CREB1 JASPAR yes 32915518
chr1 168312088 168312100 CREB1 JASPAR yes 118394892
chr1 168312106 168312125 CTCF JASPAR yes 32915519
chr1 168312106 168312125 CTCF JASPAR yes 118394893
chr1 168312111 168312121 FIGLA JASPAR yes 32915520
chr1 168312111 168312121 FIGLA JASPAR yes 118394894
chr1 168312137 168312155 ESR1 JASPAR yes 32915521
chr1 168312137 168312155 ESR1 JASPAR yes 118394895
chr1 168312141 168312151 SREBF1 JASPAR yes 32915522
chr1 168312141 168312151 SREBF2 JASPAR yes 32915523
chr1 168312141 168312151 SREBF1 JASPAR yes 118394896
chr1 168312141 168312151 SREBF2 JASPAR yes 118394897
chr1 168312178 168312193 MEF2C JASPAR yes 32915524
chr1 168312178 168312193 MEF2C JASPAR yes 118394898
chr1 168312183 168312189 TBP TRANSFAC yes 32915525
chr1 168312183 168312189 TBP TRANSFAC yes 118394899
chr1 168312202 168312218 SRF JASPAR yes 32915526
chr1 168312202 168312218 SRF JASPAR yes 118394900
chr1 168312202 168312220 SRF JASPAR yes 32915527
chr1 168312202 168312220 SRF JASPAR yes 118394901
chr1 168312203 168312208 ETS2 TRANSFAC yes 32915528
chr1 168312203 168312208 ETS2 TRANSFAC yes 118394902
chr1 168312211 168312216 ETS2 TRANSFAC yes 32915529
chr1 168312211 168312216 ETS2 TRANSFAC yes 118394903
chr1 168312211 168312219 EHF JASPAR yes 32915530
chr1 168312211 168312219 EHF JASPAR yes 118394904
chr1 168312257 168312278 IRF1 JASPAR yes 32915531
chr1 168312257 168312278 IRF1 JASPAR yes 118394905
chr1 168312259 168312274 IRF9 JASPAR yes 32915532
chr1 168312259 168312274 IRF9 JASPAR yes 118394906
chr1 168312260 168312274 IRF8 JASPAR yes 32915533
chr1 168312260 168312274 IRF8 JASPAR yes 118394907
SNP sites on vista3799[chr1:168311962-168312260]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 168311995 rs530603432 GAGCCA G
CTCF EGR1 RAD21 SMC3
707914
chr1 168312034 rs77167856 C T
CTCF EGR1 RAD21 SMC3 SP1 TFAP2A TFAP2B
707915
chr1 168312082 rs2076061 A G
CTCF EGR1 RAD21 SMC3
707916
Genes possibly regulated by vista3799[chr1:168311962-168312260]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 168250278 168283664 + TBX19 ENSG00000143178.8 168250278 0.86 1.0 1540 38316
Expression level of Genes
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miRNAs possibly regulated by vista3799[chr1:168311962-168312260]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results