EnhancerDB
  1. Home
  2. Enhancers
  3. vista380[chr1:12127865-12128182]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista380[chr1:12127865-12128182]
Back to top
Tissue distribution of vista380
Back to top
Transcription factor that possibly regulate vista380[chr1:12127865-12128182]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 12127862 12127876 TLX1 JASPAR yes 26798278
chr1 12127862 12127876 TLX1 JASPAR yes 118231278
chr1 12127870 12127874 LFA1 TRANSFAC yes 26798279
chr1 12127870 12127874 LFA1 TRANSFAC yes 118231279
chr1 12127888 12127900 IRF1 JASPAR yes 26798280
chr1 12127888 12127900 IRF1 JASPAR yes 118231280
chr1 12127890 12127896 TCF4 TRANSFAC yes 26798281
chr1 12127890 12127896 TCF4 TRANSFAC yes 118231281
chr1 12127904 12127924 TP53 JASPAR yes 26798282
chr1 12127904 12127924 TP53 JASPAR yes 118231282
chr1 12127906 12127922 SOX4 JASPAR yes 26798283
chr1 12127906 12127922 SOX4 JASPAR yes 118231283
chr1 12127909 12127913 YY1 TRANSFAC yes 26798284
chr1 12127909 12127913 YY1 TRANSFAC yes 118231284
chr1 12127938 12127959 ZNF263 JASPAR yes 26798285
chr1 12127938 12127959 ZNF263 JASPAR yes 118231285
chr1 12127945 12127960 ZIC3 JASPAR yes 26798286
chr1 12127945 12127960 ZIC4 JASPAR yes 26798287
chr1 12127945 12127960 ZIC3 JASPAR yes 118231286
chr1 12127945 12127960 ZIC4 JASPAR yes 118231287
chr1 12127946 12127960 GLIS2 JASPAR yes 26798288
chr1 12127946 12127960 ZIC1 JASPAR yes 26798289
chr1 12127946 12127960 GLIS2 JASPAR yes 118231288
chr1 12127946 12127960 ZIC1 JASPAR yes 118231289
chr1 12127949 12127954 SP1 TRANSFAC yes 26798290
chr1 12127949 12127954 SP1 TRANSFAC yes 118231290
chr1 12127949 12127955 SP1 TRANSFAC yes 26798291
chr1 12127949 12127955 SP1 TRANSFAC yes 118231291
chr1 12127949 12127959 SP1 JASPAR yes 26798292
chr1 12127949 12127959 SP1 JASPAR yes 118231292
chr1 12127949 12127969 RREB1 JASPAR yes 26798293
chr1 12127949 12127969 RREB1 JASPAR yes 118231293
chr1 12127950 12127960 ZNF740 JASPAR yes 26798294
chr1 12127950 12127960 ZNF740 JASPAR yes 118231294
chr1 12127953 12127967 PLAG1 JASPAR yes 26798295
chr1 12127953 12127967 PLAG1 JASPAR yes 118231295
chr1 12127954 12127961 SP1 TRANSFAC yes 26798296
chr1 12127954 12127961 SP1 TRANSFAC yes 118231296
chr1 12127954 12127964 SP1 JASPAR yes 26798297
chr1 12127954 12127964 SP1 JASPAR yes 118231297
chr1 12127954 12127968 PLAG1 JASPAR yes 26798298
chr1 12127954 12127968 PLAG1 JASPAR yes 118231298
chr1 12127955 12127963 SP1 TRANSFAC yes 26798299
chr1 12127955 12127963 SP1 TRANSFAC yes 118231299
chr1 12127956 12127961 SP1 TRANSFAC yes 26798300
chr1 12127956 12127961 SP1 TRANSFAC yes 118231300
chr1 12127956 12127967 E2F4 JASPAR yes 26798301
chr1 12127956 12127967 E2F4 JASPAR yes 118231301
chr1 12127957 12127962 SP1 TRANSFAC yes 26798302
chr1 12127957 12127962 SP1 TRANSFAC yes 118231302
chr1 12127957 12127963 SP1 TRANSFAC yes 26798303
chr1 12127957 12127963 SP1 TRANSFAC yes 118231303
chr1 12127957 12127967 SP1 JASPAR yes 26798304
chr1 12127957 12127967 SP1 JASPAR yes 118231304
chr1 12127958 12127968 ZNF740 JASPAR yes 26798305
chr1 12127958 12127968 ZNF740 JASPAR yes 118231305
chr1 12127959 12127969 SP1 JASPAR yes 26798306
chr1 12127959 12127969 ZNF740 JASPAR yes 26798307
chr1 12127959 12127969 SP1 JASPAR yes 118231306
chr1 12127959 12127969 ZNF740 JASPAR yes 118231307
chr1 12127960 12127970 SP1 JASPAR yes 26798308
chr1 12127960 12127970 ZNF740 JASPAR yes 26798309
chr1 12127960 12127970 SP1 JASPAR yes 118231308
chr1 12127960 12127970 ZNF740 JASPAR yes 118231309
chr1 12127964 12127985 ZNF263 JASPAR yes 26798310
chr1 12127964 12127985 ZNF263 JASPAR yes 118231310
chr1 12127975 12127985 SP1 JASPAR yes 26798311
chr1 12127975 12127985 SP1 JASPAR yes 118231311
chr1 12127975 12127996 ZNF263 JASPAR yes 26798312
chr1 12127975 12127996 ZNF263 JASPAR yes 118231312
chr1 12127976 12127983 CEBPA TRANSFAC yes 26798313
chr1 12127976 12127983 CEBPA TRANSFAC yes 118231313
chr1 12127984 12127999 TFAP2C JASPAR yes 26798314
chr1 12127984 12127999 TFAP2C JASPAR yes 118231314
chr1 12127990 12128011 ZNF263 JASPAR yes 26798315
chr1 12127990 12128011 ZNF263 JASPAR yes 118231315
chr1 12128024 12128030 YY1 JASPAR yes 26798316
chr1 12128024 12128030 YY1 JASPAR yes 118231316
chr1 12128037 12128043 SP1 TRANSFAC yes 26798317
chr1 12128037 12128043 SP1 TRANSFAC yes 118231317
chr1 12128038 12128043 SP1 TRANSFAC yes 26798318
chr1 12128038 12128043 SP1 TRANSFAC yes 118231318
chr1 12128049 12128063 NR2F1 JASPAR yes 26798319
chr1 12128049 12128063 NR2F1 JASPAR yes 118231319
chr1 12128057 12128077 ESR1 JASPAR yes 26798320
chr1 12128057 12128077 ESR1 JASPAR yes 118231320
chr1 12128058 12128062 ESR1 TRANSFAC yes 26798321
chr1 12128058 12128062 ESR1 TRANSFAC yes 118231321
chr1 12128085 12128106 ZNF263 JASPAR yes 26798322
chr1 12128085 12128106 ZNF263 JASPAR yes 118231322
chr1 12128095 12128105 ELK1 JASPAR yes 26798323
chr1 12128095 12128105 ELK1 JASPAR yes 118231323
chr1 12128097 12128107 ELK1 JASPAR yes 26798324
chr1 12128097 12128107 ELK3 JASPAR yes 26798325
chr1 12128097 12128107 ETV4 JASPAR yes 26798326
chr1 12128097 12128107 ELK1 JASPAR yes 118231324
chr1 12128097 12128107 ELK3 JASPAR yes 118231325
chr1 12128097 12128107 ETV4 JASPAR yes 118231326
chr1 12128097 12128108 ELK4 JASPAR yes 26798327
chr1 12128097 12128108 FLI1 JASPAR yes 26798328
chr1 12128097 12128108 ELK4 JASPAR yes 118231327
chr1 12128097 12128108 FLI1 JASPAR yes 118231328
chr1 12128099 12128105 ETS1 JASPAR yes 26798329
chr1 12128099 12128105 SPI1 JASPAR yes 26798330
chr1 12128099 12128105 ETS1 JASPAR yes 118231329
chr1 12128099 12128105 SPI1 JASPAR yes 118231330
chr1 12128101 12128111 SP1 JASPAR yes 26798331
chr1 12128101 12128111 SP1 JASPAR yes 118231331
chr1 12128120 12128135 STAT2 JASPAR yes 26798332
chr1 12128120 12128135 STAT2 JASPAR yes 118231332
chr1 12128121 12128135 STAT1 JASPAR yes 26798333
chr1 12128121 12128135 STAT1 JASPAR yes 118231333
chr1 12128173 12128187 JUN JASPAR yes 26798334
chr1 12128173 12128187 JUN JASPAR yes 118231334
chr1 12128176 12128187 JUNB JASPAR yes 26798335
chr1 12128176 12128187 JUNB JASPAR yes 118231335
chr1 12128177 12128188 FOS JASPAR yes 26798336
chr1 12128177 12128188 JUND JASPAR yes 26798337
chr1 12128177 12128188 FOS JASPAR yes 118231336
chr1 12128177 12128188 JUND JASPAR yes 118231337
chr1 12128178 12128192 JUN JASPAR yes 26798338
chr1 12128178 12128192 JUN JASPAR yes 118231338
chr1 12128179 12128190 BATF JASPAR yes 26798339
chr1 12128179 12128190 BATF JASPAR yes 118231339
SNP sites on vista380[chr1:12127865-12128182]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 12127875 rs565140740 A G
TLX1
83507
chr1 12127932 rs565749638 C T no 83508
chr1 12127960 rs142444137 C CG
E2F4 GLIS2 PLAG1 RREB1 SP1 ZIC1 ZIC3 ZIC4 ZNF740
83509
chr1 12127960 rs561850635 C CG
E2F4 GLIS2 PLAG1 RREB1 SP1 ZIC1 ZIC3 ZIC4 ZNF740
83510
Genes possibly regulated by vista380[chr1:12127865-12128182]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 12040238 12073571 + MFN2 ENSG00000116688.12 12040238 0.73 1.0 164 12373
chr1 12079523 12092102 + MIIP ENSG00000116691.6 12079523 0.73 1.0 165 51658
chr1 12123434 12204264 + TNFRSF8 ENSG00000120949.10 12123434 0.99 0.98 166 95569
chr1 12227060 12269285 + TNFRSF1B ENSG00000028137.12 12227060 0.88 0.96 167 1122
Expression level of Genes
Back to top
miRNAs possibly regulated by vista380[chr1:12127865-12128182]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results