EnhancerDB
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  3. vista3812[chr1:168489681-168489889]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3812[chr1:168489681-168489889]
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Tissue distribution of vista3812
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Transcription factor that possibly regulate vista3812[chr1:168489681-168489889]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 168489680 168489701 ZNF263 JASPAR yes 32936035
chr1 168489680 168489701 ZNF263 JASPAR yes 118395415
chr1 168489681 168489702 ZNF263 JASPAR yes 32936036
chr1 168489681 168489702 ZNF263 JASPAR yes 118395416
chr1 168489721 168489726 SP1 TRANSFAC yes 32936037
chr1 168489721 168489726 SP1 TRANSFAC yes 118395417
chr1 168489725 168489736 ESRRA JASPAR yes 32936038
chr1 168489725 168489736 ESRRA JASPAR yes 118395418
chr1 168489729 168489733 ESR1 TRANSFAC yes 32936039
chr1 168489729 168489733 ESR1 TRANSFAC yes 118395419
chr1 168489802 168489817 RUNX2 JASPAR yes 32936040
chr1 168489802 168489817 RUNX2 JASPAR yes 118395420
chr1 168489826 168489831 MYC TRANSFAC yes 32936041
chr1 168489826 168489831 MYC TRANSFAC yes 118395421
chr1 168489832 168489845 EOMES JASPAR yes 32936042
chr1 168489832 168489845 EOMES JASPAR yes 118395422
chr1 168489833 168489841 MGA JASPAR yes 32936043
chr1 168489833 168489841 TBX15 JASPAR yes 32936044
chr1 168489833 168489841 TBX1 JASPAR yes 32936045
chr1 168489833 168489841 TBX4 JASPAR yes 32936046
chr1 168489833 168489841 TBX5 JASPAR yes 32936047
chr1 168489833 168489841 MGA JASPAR yes 118395423
chr1 168489833 168489841 TBX15 JASPAR yes 118395424
chr1 168489833 168489841 TBX1 JASPAR yes 118395425
chr1 168489833 168489841 TBX4 JASPAR yes 118395426
chr1 168489833 168489841 TBX5 JASPAR yes 118395427
chr1 168489837 168489848 NFE2L2 JASPAR yes 32936048
chr1 168489837 168489848 NFE2L2 JASPAR yes 118395428
chr1 168489853 168489860 NKX3-1 JASPAR yes 32936049
chr1 168489853 168489860 NKX3-1 JASPAR yes 118395429
chr1 168489873 168489886 JUN JASPAR yes 32936050
chr1 168489873 168489886 JUN JASPAR yes 118395430
chr1 168489888 168489902 ONECUT3 JASPAR yes 32936051
chr1 168489888 168489902 ONECUT3 JASPAR yes 118395431
SNP sites on vista3812[chr1:168489681-168489889]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 168489725 rs541706142 GC G
ESRRA SP1
709879
chr1 168489762 rs80218693 C T no 709880
chr1 168489783 rs561677696 CAG C no 709881
chr1 168489786 rs199528481 G A,C,T no 709882
chr1 168489813 rs143945560 G A
RUNX2
709883
chr1 168489847 rs1323530 C T
NFE2L2
709884
Genes possibly regulated by vista3812[chr1:168489681-168489889]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 168510003 168513235 - XCL2 ENSG00000143185.3 168513235 0.91 1.0 1541 76654
chr1 168545711 168551315 + XCL1 ENSG00000143184.4 168545711 0.91 1.0 1542 44178
Expression level of Genes
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miRNAs possibly regulated by vista3812[chr1:168489681-168489889]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results