EnhancerDB
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  3. vista3822[chr1:168994253-168994531]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3822[chr1:168994253-168994531]
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Tissue distribution of vista3822
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Transcription factor that possibly regulate vista3822[chr1:168994253-168994531]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 168994150 168994462 RUNX3 UCSC Txn Factor no Conserved 107844893
chr1 168994171 168994456 PAX5 UCSC Txn Factor no Conserved 107844898
chr1 168994237 168994256 RFX2 JASPAR yes 32977885
chr1 168994237 168994256 RFX2 JASPAR yes 118395866
chr1 168994255 168994260 NFY TRANSFAC yes 32977886
chr1 168994255 168994260 NFY TRANSFAC yes 118395867
chr1 168994264 168994270 ETS1 JASPAR yes 32977887
chr1 168994264 168994270 SPI1 JASPAR yes 32977888
chr1 168994264 168994270 ETS1 JASPAR yes 118395868
chr1 168994264 168994270 SPI1 JASPAR yes 118395869
chr1 168994277 168994288 USF2 JASPAR yes 32977889
chr1 168994277 168994288 USF2 JASPAR yes 118395870
chr1 168994292 168994296 ESR1 TRANSFAC yes 32977890
chr1 168994292 168994296 ESR1 TRANSFAC yes 118395871
chr1 168994324 168994342 NFYA JASPAR yes 32977891
chr1 168994324 168994342 NFYA JASPAR yes 118395872
chr1 168994324 168994343 PAX5 JASPAR yes 32977892
chr1 168994324 168994343 PAX5 JASPAR yes 118395873
chr1 168994326 168994330 LFA1 TRANSFAC yes 32977893
chr1 168994326 168994330 LFA1 TRANSFAC yes 118395874
chr1 168994347 168994366 PAX5 JASPAR yes 32977894
chr1 168994347 168994366 PAX5 JASPAR yes 118395875
chr1 168994379 168994383 NFE TRANSFAC yes 32977895
chr1 168994379 168994383 NFE TRANSFAC yes 118395876
chr1 168994386 168994397 CDX2 JASPAR yes 32977896
chr1 168994386 168994397 CDX2 JASPAR yes 118395877
chr1 168994387 168994398 HOXA10 JASPAR yes 32977897
chr1 168994387 168994398 HOXA10 JASPAR yes 118395878
chr1 168994388 168994397 CDX1 JASPAR yes 32977898
chr1 168994388 168994397 CDX1 JASPAR yes 118395879
chr1 168994396 168994407 NFKB1 JASPAR yes 32977899
chr1 168994396 168994407 NFKB1 JASPAR yes 118395880
chr1 168994399 168994414 HNF4G JASPAR yes 32977900
chr1 168994399 168994414 HNF4G JASPAR yes 118395881
chr1 168994400 168994414 RXRB JASPAR yes 32977901
chr1 168994400 168994414 RXRG JASPAR yes 32977902
chr1 168994400 168994414 RXRB JASPAR yes 118395882
chr1 168994400 168994414 RXRG JASPAR yes 118395883
chr1 168994400 168994415 HNF4A JASPAR yes 32977903
chr1 168994400 168994415 HNF4A JASPAR yes 118395884
chr1 168994412 168994430 IRF2 JASPAR yes 32977904
chr1 168994412 168994430 IRF2 JASPAR yes 118395885
chr1 168994415 168994430 PRDM1 JASPAR yes 32977905
chr1 168994415 168994430 PRDM1 JASPAR yes 118395886
chr1 168994422 168994426 YY1 TRANSFAC yes 32977906
chr1 168994422 168994426 YY1 TRANSFAC yes 118395887
chr1 168994427 168994448 IRF1 JASPAR yes 32977907
chr1 168994427 168994448 IRF1 JASPAR yes 118395888
chr1 168994429 168994444 STAT2 JASPAR yes 32977908
chr1 168994429 168994444 STAT2 JASPAR yes 118395889
chr1 168994430 168994444 STAT1 JASPAR yes 32977909
chr1 168994430 168994444 STAT1 JASPAR yes 118395890
chr1 168994431 168994446 IRF9 JASPAR yes 32977910
chr1 168994431 168994446 IRF9 JASPAR yes 118395891
chr1 168994439 168994444 ETS2 TRANSFAC yes 32977911
chr1 168994439 168994444 ETS2 TRANSFAC yes 118395892
chr1 168994476 168994482 SOX10 JASPAR yes 32977912
chr1 168994476 168994482 SOX10 JASPAR yes 118395893
chr1 168994488 168994494 NFIC JASPAR yes 32977913
chr1 168994488 168994494 NFIC JASPAR yes 118395894
chr1 168994497 168994500 MYB TRANSFAC yes 32977914
chr1 168994497 168994500 MYB TRANSFAC yes 118395895
chr1 168994502 168994506 TEAD2 TRANSFAC yes 32977915
chr1 168994502 168994506 TEAD2 TRANSFAC yes 118395896
chr1 168994509 168994514 GATA2 JASPAR yes 32977916
chr1 168994509 168994514 GATA2 JASPAR yes 118395897
chr1 168994514 168994518 YY1 TRANSFAC yes 32977917
chr1 168994514 168994518 YY1 TRANSFAC yes 118395898
chr1 168994518 168994530 FOXI1 JASPAR yes 32977918
chr1 168994518 168994530 FOXI1 JASPAR yes 118395899
chr1 168994528 168994541 ZBTB18 JASPAR yes 32977919
chr1 168994528 168994541 ZBTB18 JASPAR yes 118395900
chr1 168994529 168994539 NHLH1 JASPAR yes 32977920
chr1 168994529 168994539 NHLH1 JASPAR yes 118395901
SNP sites on vista3822[chr1:168994253-168994531]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 168994270 rs189456302 G A
ETS1 PAX5 RUNX3 SPI1
714280
chr1 168994348 rs139452480 GTTA G
PAX5 RUNX3
714281
chr1 168994348 rs373159911 GTTA G
PAX5 RUNX3
714282
chr1 168994423 rs149157772 C G
IRF2 PAX5 PRDM1 RUNX3 YY1
714283
chr1 168994513 rs7544086 C T
GATA2
714284
Genes possibly regulated by vista3822[chr1:168994253-168994531]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 169074935 169101960 + ATP1B1 ENSG00000143153.8 169074935 0.92 0.99 1544 19596
Expression level of Genes
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miRNAs possibly regulated by vista3822[chr1:168994253-168994531]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results