EnhancerDB
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  3. vista3825[chr1:169443033-169443373]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3825[chr1:169443033-169443373]
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Tissue distribution of vista3825
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Transcription factor that possibly regulate vista3825[chr1:169443033-169443373]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 169443013 169443034 IRF1 JASPAR yes 33003747
chr1 169443013 169443034 IRF1 JASPAR yes 118395939
chr1 169443036 169443040 YY1 TRANSFAC yes 33003752
chr1 169443036 169443040 YY1 TRANSFAC yes 118395940
chr1 169443036 169443046 HOXD11 JASPAR yes 33003753
chr1 169443036 169443046 HOXD11 JASPAR yes 118395941
chr1 169443036 169443047 HOXC12 JASPAR yes 33003754
chr1 169443036 169443047 HOXC12 JASPAR yes 118395942
chr1 169443061 169443065 NFE TRANSFAC yes 33003755
chr1 169443061 169443065 NFE TRANSFAC yes 118395943
chr1 169443061 169443066 GATA1 TRANSFAC yes 33003756
chr1 169443061 169443066 GATA1 TRANSFAC yes 118395944
chr1 169443061 169443067 GATA3 JASPAR yes 33003757
chr1 169443061 169443067 GATA3 JASPAR yes 118395945
chr1 169443062 169443079 ZNF410 JASPAR yes 33003758
chr1 169443062 169443079 ZNF410 JASPAR yes 118395946
chr1 169443065 169443076 CDX2 JASPAR yes 33003759
chr1 169443065 169443076 CDX2 JASPAR yes 118395947
chr1 169443067 169443076 CDX1 JASPAR yes 33003760
chr1 169443067 169443076 CDX1 JASPAR yes 118395948
chr1 169443086 169443101 HSF1 JASPAR yes 33003761
chr1 169443086 169443101 HSF1 JASPAR yes 118395949
chr1 169443087 169443100 HSF1 JASPAR yes 33003762
chr1 169443087 169443100 HSF2 JASPAR yes 33003763
chr1 169443087 169443100 HSF4 JASPAR yes 33003764
chr1 169443087 169443100 HSF1 JASPAR yes 118395950
chr1 169443087 169443100 HSF2 JASPAR yes 118395951
chr1 169443087 169443100 HSF4 JASPAR yes 118395952
chr1 169443090 169443098 OTX1 JASPAR yes 33003765
chr1 169443090 169443098 OTX1 JASPAR yes 118395953
chr1 169443097 169443107 MLXIPL JASPAR yes 33003766
chr1 169443097 169443107 MLXIPL JASPAR yes 118395954
chr1 169443099 169443104 MYC TRANSFAC yes 33003767
chr1 169443099 169443104 USF1 TRANSFAC yes 33003768
chr1 169443099 169443104 USF2 TRANSFAC yes 33003769
chr1 169443099 169443104 MYC TRANSFAC yes 118395955
chr1 169443099 169443104 USF1 TRANSFAC yes 118395956
chr1 169443099 169443104 USF2 TRANSFAC yes 118395957
chr1 169443105 169443117 POU3F1 JASPAR yes 33003770
chr1 169443105 169443117 POU3F2 JASPAR yes 33003771
chr1 169443105 169443117 POU3F1 JASPAR yes 118395958
chr1 169443105 169443117 POU3F2 JASPAR yes 118395959
chr1 169443121 169443133 MEF2A JASPAR yes 33003772
chr1 169443121 169443133 MEF2A JASPAR yes 118395960
chr1 169443130 169443140 EN2 JASPAR yes 33003773
chr1 169443130 169443140 GBX1 JASPAR yes 33003774
chr1 169443130 169443140 GBX2 JASPAR yes 33003775
chr1 169443130 169443140 EN2 JASPAR yes 118395961
chr1 169443130 169443140 GBX1 JASPAR yes 118395962
chr1 169443130 169443140 GBX2 JASPAR yes 118395963
chr1 169443131 169443139 DLX6 JASPAR yes 33003776
chr1 169443131 169443139 MSX1 JASPAR yes 33003777
chr1 169443131 169443139 DLX6 JASPAR yes 118395964
chr1 169443131 169443139 MSX1 JASPAR yes 118395965
chr1 169443132 169443144 POU3F2 JASPAR yes 33003778
chr1 169443132 169443144 POU3F2 JASPAR yes 118395966
chr1 169443137 169443147 BARHL2 JASPAR yes 33003779
chr1 169443137 169443147 BARHL2 JASPAR yes 118395967
chr1 169443138 169443150 SRF JASPAR yes 33003780
chr1 169443138 169443150 SRF JASPAR yes 118395968
chr1 169443139 169443143 YY1 TRANSFAC yes 33003781
chr1 169443139 169443143 YY1 TRANSFAC yes 118395969
chr1 169443139 169443149 HOXB13 JASPAR yes 33003782
chr1 169443139 169443149 HOXB13 JASPAR yes 118395970
chr1 169443139 169443154 STAT1 JASPAR yes 33003783
chr1 169443139 169443154 STAT1 JASPAR yes 118395971
chr1 169443141 169443152 STAT1 JASPAR yes 33003784
chr1 169443141 169443152 STAT3 JASPAR yes 33003785
chr1 169443141 169443152 STAT1 JASPAR yes 118395972
chr1 169443141 169443152 STAT3 JASPAR yes 118395973
chr1 169443157 169443165 FOXL1 JASPAR yes 33003786
chr1 169443157 169443165 FOXL1 JASPAR yes 118395974
chr1 169443167 169443171 YY1 TRANSFAC yes 33003787
chr1 169443167 169443171 YY1 TRANSFAC yes 118395975
chr1 169443183 169443198 MEF2C JASPAR yes 33003788
chr1 169443183 169443198 MEF2C JASPAR yes 118395976
chr1 169443184 169443199 MEF2A JASPAR yes 33003789
chr1 169443184 169443199 MEF2A JASPAR yes 118395977
chr1 169443185 169443197 MEF2A JASPAR yes 33003790
chr1 169443185 169443197 MEF2D JASPAR yes 33003791
chr1 169443185 169443197 MEF2A JASPAR yes 118395978
chr1 169443185 169443197 MEF2D JASPAR yes 118395979
chr1 169443193 169443196 MYB TRANSFAC yes 33003792
chr1 169443193 169443196 MYB TRANSFAC yes 118395980
chr1 169443193 169443209 SRF JASPAR yes 33003793
chr1 169443193 169443209 SRF JASPAR yes 118395981
chr1 169443199 169443203 TEAD2 TRANSFAC yes 33003794
chr1 169443199 169443203 TEAD2 TRANSFAC yes 118395982
chr1 169443206 169443221 FOXA1 JASPAR yes 33003795
chr1 169443206 169443221 FOXA1 JASPAR yes 118395983
chr1 169443209 169443220 FOXB1 JASPAR yes 33003796
chr1 169443209 169443220 FOXB1 JASPAR yes 118395984
chr1 169443209 169443224 FOXA1 JASPAR yes 33003797
chr1 169443209 169443224 FOXA1 JASPAR yes 118395985
chr1 169443210 169443221 FOXB1 JASPAR yes 33003798
chr1 169443210 169443221 FOXB1 JASPAR yes 118395986
chr1 169443217 169443238 IRF1 JASPAR yes 33003799
chr1 169443217 169443238 IRF1 JASPAR yes 118395987
chr1 169443219 169443224 ETS2 TRANSFAC yes 33003800
chr1 169443219 169443224 ETS2 TRANSFAC yes 118395988
chr1 169443219 169443234 IRF9 JASPAR yes 33003801
chr1 169443219 169443234 IRF9 JASPAR yes 118395989
chr1 169443242 169443249 NKX3-1 JASPAR yes 33003802
chr1 169443242 169443249 NKX3-1 JASPAR yes 118395990
chr1 169443246 169443249 MYB TRANSFAC yes 33003803
chr1 169443246 169443249 MYB TRANSFAC yes 118395991
chr1 169443322 169443340 NR3C1 JASPAR yes 33003804
chr1 169443322 169443340 NR3C1 JASPAR yes 118395992
chr1 169443323 169443337 IRF7 JASPAR yes 33003805
chr1 169443323 169443337 IRF7 JASPAR yes 118395993
chr1 169443328 169443332 YY1 TRANSFAC yes 33003806
chr1 169443328 169443332 YY1 TRANSFAC yes 118395994
chr1 169443343 169443353 HOXA13 JASPAR yes 33003807
chr1 169443343 169443353 HOXA13 JASPAR yes 118395995
chr1 169443344 169443353 CDX1 JASPAR yes 33003808
chr1 169443344 169443353 CDX1 JASPAR yes 118395996
chr1 169443356 169443371 MEF2A JASPAR yes 33003809
chr1 169443356 169443371 MEF2A JASPAR yes 118395997
chr1 169443357 169443372 MEF2C JASPAR yes 33003810
chr1 169443357 169443372 MEF2C JASPAR yes 118395998
chr1 169443358 169443370 MEF2A JASPAR yes 33003811
chr1 169443358 169443370 MEF2D JASPAR yes 33003812
chr1 169443358 169443370 MEF2A JASPAR yes 118395999
chr1 169443358 169443370 MEF2D JASPAR yes 118396000
chr1 169443359 169443369 MEF2A JASPAR yes 33003813
chr1 169443359 169443369 MEF2A JASPAR yes 118396001
chr1 169443360 169443364 YY1 TRANSFAC yes 33003814
chr1 169443360 169443364 YY1 TRANSFAC yes 118396002
chr1 169443360 169443377 ZNF410 JASPAR yes 33003815
chr1 169443360 169443377 ZNF410 JASPAR yes 118396003
chr1 169443362 169443372 HOXA13 JASPAR yes 33003816
chr1 169443362 169443372 HOXB13 JASPAR yes 33003817
chr1 169443362 169443372 HOXD13 JASPAR yes 33003818
chr1 169443362 169443372 HOXA13 JASPAR yes 118396004
chr1 169443362 169443372 HOXB13 JASPAR yes 118396005
chr1 169443362 169443372 HOXD13 JASPAR yes 118396006
chr1 169443362 169443373 HOXA10 JASPAR yes 33003819
chr1 169443362 169443373 HOXA10 JASPAR yes 118396007
chr1 169443363 169443372 CDX1 JASPAR yes 33003820
chr1 169443363 169443372 CDX1 JASPAR yes 118396008
chr1 169443363 169443374 CDX2 JASPAR yes 33003821
chr1 169443363 169443374 CDX2 JASPAR yes 118396009
chr1 169443368 169443388 RREB1 JASPAR yes 33003822
chr1 169443368 169443388 RREB1 JASPAR yes 118396010
SNP sites on vista3825[chr1:169443033-169443373]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 169443156 rs190156439 A G no 716581
chr1 169443344 rs146643548 G T
CDX1 HOXA13
716582
Genes possibly regulated by vista3825[chr1:169443033-169443373]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 169364108 169429907 - CCDC181 ENSG00000117477.8 169429907 0.89 0.98 1547 86874
chr1 169433147 169455241 - SLC19A2 ENSG00000117479.8 169455241 0.68 0.99 1548 88132
Expression level of Genes
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miRNAs possibly regulated by vista3825[chr1:169443033-169443373]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results