EnhancerDB
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  3. vista3829[chr1:169540812-169540977]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3829[chr1:169540812-169540977]
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Tissue distribution of vista3829
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Transcription factor that possibly regulate vista3829[chr1:169540812-169540977]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 169540814 169540834 TBX19 JASPAR yes 118396168
chr1 169540816 169540832 T JASPAR yes 118396169
chr1 169540826 169540837 STAT1 JASPAR yes 118396170
chr1 169540826 169540837 STAT3 JASPAR yes 118396171
chr1 169540826 169540839 ELF1 JASPAR yes 118396172
chr1 169540829 169540836 ETS1 TRANSFAC yes 118396173
chr1 169540868 169540879 FOSL2 JASPAR yes 118396174
chr1 169540892 169540896 H1TF2 TRANSFAC yes 118396175
chr1 169540892 169540896 NFE TRANSFAC yes 118396176
chr1 169540892 169540896 SRF TRANSFAC yes 118396177
chr1 169540893 169540904 FLI1 JASPAR yes 118396178
chr1 169540894 169540904 ERF JASPAR yes 118396179
chr1 169540894 169540904 ERG JASPAR yes 118396180
chr1 169540894 169540904 ETS1 JASPAR yes 118396181
chr1 169540894 169540904 FLI1 JASPAR yes 118396182
chr1 169540894 169540905 ELF5 JASPAR yes 118396183
chr1 169540894 169540905 ETV2 JASPAR yes 118396184
chr1 169540894 169540906 EHF JASPAR yes 118396185
chr1 169540894 169540906 ELF1 JASPAR yes 118396186
chr1 169540894 169540907 ELF1 JASPAR yes 118396187
chr1 169540894 169540908 SPIC JASPAR yes 118396188
chr1 169540895 169540903 FEV JASPAR yes 118396189
chr1 169540905 169540916 FOXB1 JASPAR yes 118396190
chr1 169540905 169540916 FOXC1 JASPAR yes 118396191
chr1 169540905 169540917 FOXC2 JASPAR yes 118396192
chr1 169540913 169540928 SOX21 JASPAR yes 118396193
chr1 169540930 169540935 SP1 TRANSFAC yes 118396194
chr1 169540973 169540976 MYB TRANSFAC yes 118396195
SNP sites on vista3829[chr1:169540812-169540977]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 169540812 rs115080675 T C no 717096
chr1 169540896 rs9332531 A C
EHF ELF1 ELF5 ERF ERG ETS1 ETV2 FEV FLI1 H1TF2 NFE SPIC SRF
717097
chr1 169540909 rs538441128 G A
FOXB1 FOXC1 FOXC2
717098
chr1 169540934 rs9332530 C T
SP1
717099
chr1 169540971 rs140600493 C T no 717100
Genes possibly regulated by vista3829[chr1:169540812-169540977]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 169433147 169455241 - SLC19A2 ENSG00000117479.8 169455241 0.68 0.99 1548 14429
chr1 169483404 169555826 - F5 ENSG00000198734.6 169555826 0.98 0.98 1549 85151
chr1 169558087 169599431 - SELP ENSG00000174175.12 169599431 0.85 0.0 1550 41546
chr1 169631245 169823221 + C1orf112 ENSG00000000460.12 169631245 0.88 0.99 1551 9732
Expression level of Genes
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miRNAs possibly regulated by vista3829[chr1:169540812-169540977]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results