EnhancerDB
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  3. vista3830[chr1:169553917-169554291]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3830[chr1:169553917-169554291]
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Tissue distribution of vista3830
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Transcription factor that possibly regulate vista3830[chr1:169553917-169554291]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 169554040 169554253 FOXA1 UCSC Txn Factor no Conserved 107844995
chr1 169553917 169553933 SOX4 JASPAR yes 118396196
chr1 169553948 169553958 GSC JASPAR yes 118396197
chr1 169553955 169553968 POU2F2 JASPAR yes 118396198
chr1 169553967 169553982 HSF1 JASPAR yes 118396199
chr1 169553968 169553981 HSF1 JASPAR yes 118396200
chr1 169553968 169553981 HSF4 JASPAR yes 118396201
chr1 169553981 169553987 HiNF-A TRANSFAC yes 118396202
chr1 169554001 169554010 SRY JASPAR yes 118396203
chr1 169554013 169554033 RREB1 JASPAR yes 118396204
chr1 169554040 169554051 BATF JASPAR yes 118396205
chr1 169554063 169554070 SPIB JASPAR yes 118396206
chr1 169554078 169554093 HNF4A JASPAR yes 118396207
chr1 169554079 169554094 HNF4G JASPAR yes 118396208
chr1 169554108 169554123 AR JASPAR yes 118396209
chr1 169554108 169554126 NR3C1 JASPAR yes 118396210
chr1 169554109 169554129 ESR1 JASPAR yes 118396211
chr1 169554132 169554147 FOXA1 JASPAR yes 118396212
chr1 169554140 169554148 FOXC1 JASPAR yes 118396213
chr1 169554146 169554156 MAX JASPAR yes 118396214
chr1 169554147 169554165 ESR2 JASPAR yes 118396215
chr1 169554149 169554160 FOS JASPAR yes 118396216
chr1 169554149 169554160 FOSL1 JASPAR yes 118396217
chr1 169554150 169554164 JUN JASPAR yes 118396218
chr1 169554151 169554157 JUN TRANSFAC yes 118396219
chr1 169554156 169554171 HNF4A JASPAR yes 118396220
chr1 169554157 169554171 RXRB JASPAR yes 118396221
chr1 169554157 169554171 RXRG JASPAR yes 118396222
chr1 169554157 169554172 HNF4G JASPAR yes 118396223
chr1 169554157 169554172 NR2C2 JASPAR yes 118396224
chr1 169554163 169554181 SRF JASPAR yes 118396225
chr1 169554168 169554172 NFE TRANSFAC yes 118396226
chr1 169554168 169554173 GATA1 TRANSFAC yes 118396227
chr1 169554168 169554174 GATA3 JASPAR yes 118396228
chr1 169554188 169554192 YY1 TRANSFAC yes 118396229
chr1 169554200 169554204 YY1 TRANSFAC yes 118396230
chr1 169554212 169554215 MYB TRANSFAC yes 118396231
chr1 169554246 169554262 ZNF143 JASPAR yes 118396232
chr1 169554263 169554274 FOXA1 JASPAR yes 118396233
chr1 169554263 169554278 FOXA1 JASPAR yes 118396234
chr1 169554264 169554276 FOXC2 JASPAR yes 118396235
SNP sites on vista3830[chr1:169553917-169554291]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 169553948 rs541472486 T C
GSC
717232
chr1 169554058 rs3753305 C G
FOXA1
717233
Genes possibly regulated by vista3830[chr1:169553917-169554291]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 169433147 169455241 - SLC19A2 ENSG00000117479.8 169455241 0.68 0.99 1548 1324
chr1 169483404 169555826 - F5 ENSG00000198734.6 169555826 0.98 0.98 1549 98465
chr1 169558087 169599431 - SELP ENSG00000174175.12 169599431 0.85 0.0 1550 54860
chr1 169631245 169823221 + C1orf112 ENSG00000000460.12 169631245 0.88 0.99 1551 23046
Expression level of Genes
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miRNAs possibly regulated by vista3830[chr1:169553917-169554291]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results