EnhancerDB
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  3. vista38319[chr21:43887564-43887652]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista38319[chr21:43887564-43887652]
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Tissue distribution of vista38319
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Transcription factor that possibly regulate vista38319[chr21:43887564-43887652]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr21 43887348 43887719 RUNX3 UCSC Txn Factor no Conserved 108492289
chr21 43887374 43887835 CTCF UCSC Txn Factor no Conserved 108492293
chr21 43887465 43887736 RAD21 UCSC Txn Factor no Conserved 108492309
chr21 43887554 43887566 NHLH1 JASPAR yes 20725347
chr21 43887554 43887566 NHLH1 JASPAR yes 118569457
chr21 43887555 43887565 NHLH1 JASPAR yes 20725348
chr21 43887555 43887565 NHLH1 JASPAR yes 118569458
chr21 43887559 43887573 GATA2 JASPAR yes 20725349
chr21 43887559 43887573 GATA2 JASPAR yes 118569459
chr21 43887574 43887595 REST JASPAR yes 20725350
chr21 43887574 43887595 REST JASPAR yes 118569460
chr21 43887575 43887594 REST JASPAR yes 20725351
chr21 43887575 43887594 REST JASPAR yes 118569461
chr21 43887594 43887613 CTCF JASPAR yes 20725352
chr21 43887594 43887613 CTCF JASPAR yes 118569462
chr21 43887632 43887647 MEF2C JASPAR yes 20725353
chr21 43887632 43887647 MEF2C JASPAR yes 118569463
chr21 43887633 43887648 MEF2A JASPAR yes 20725354
chr21 43887633 43887648 MEF2A JASPAR yes 118569464
chr21 43887633 43887649 SRF JASPAR yes 20725355
chr21 43887633 43887649 SRF JASPAR yes 118569465
chr21 43887634 43887646 SRF JASPAR yes 20725356
chr21 43887634 43887646 SRF JASPAR yes 118569466
chr21 43887638 43887649 PHOX2A JASPAR yes 20725357
chr21 43887638 43887649 PHOX2A JASPAR yes 118569467
chr21 43887639 43887654 JUND JASPAR yes 20725358
chr21 43887639 43887654 JUND JASPAR yes 118569468
chr21 43887640 43887653 JUN JASPAR yes 20725359
chr21 43887640 43887653 JUN JASPAR yes 118569469
SNP sites on vista38319[chr21:43887564-43887652]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista38319[chr21:43887564-43887652]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr21 43791999 43816955 - TMPRSS3 ENSG00000160183.9 43816955 0.85 0.99 18901 29391
chr21 43824008 43867791 + UBASH3A ENSG00000160185.9 43824008 0.95 0.99 18902 36444
chr21 43892596 43916464 - RSPH1 ENSG00000160188.5 43916464 0.88 1.0 18903 71188
chr21 43916118 44001550 + SLC37A1 ENSG00000160190.9 43916118 0.71 1.0 18904 71534
Expression level of Genes
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miRNAs possibly regulated by vista38319[chr21:43887564-43887652]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results