EnhancerDB
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  3. vista3835[chr1:169884881-169885211]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3835[chr1:169884881-169885211]
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Tissue distribution of vista3835
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Transcription factor that possibly regulate vista3835[chr1:169884881-169885211]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 169884824 169885168 EBF1 UCSC Txn Factor no Conserved 107845039
chr1 169884872 169885192 RUNX3 UCSC Txn Factor no Conserved 107845045
chr1 169884945 169885130 BHLHE40 UCSC Txn Factor no Conserved 107845059
chr1 169884988 169885217 SPI1 UCSC Txn Factor no Conserved 107845062
chr1 169884904 169884915 CEBPA JASPAR yes 33017434
chr1 169884904 169884915 CEBPA JASPAR yes 118396471
chr1 169884904 169884916 HLF JASPAR yes 33017435
chr1 169884904 169884916 HLF JASPAR yes 118396472
chr1 169884906 169884917 NFIL3 JASPAR yes 33017436
chr1 169884906 169884917 NFIL3 JASPAR yes 118396473
chr1 169884917 169884932 STAT1 JASPAR yes 33017437
chr1 169884917 169884932 STAT1 JASPAR yes 118396474
chr1 169884919 169884930 STAT1 JASPAR yes 33017438
chr1 169884919 169884930 STAT1 JASPAR yes 118396475
chr1 169884932 169884949 ESR1 JASPAR yes 33017439
chr1 169884932 169884949 ESR1 JASPAR yes 118396476
chr1 169884938 169884943 MYC TRANSFAC yes 33017440
chr1 169884938 169884943 MYC TRANSFAC yes 118396477
chr1 169884949 169884957 HOXA5 JASPAR yes 33017441
chr1 169884949 169884957 HOXA5 JASPAR yes 118396478
chr1 169884975 169884989 STAT1 JASPAR yes 33017442
chr1 169884975 169884989 STAT1 JASPAR yes 118396479
chr1 169884981 169884985 YY1 TRANSFAC yes 33017443
chr1 169884981 169884985 YY1 TRANSFAC yes 118396480
chr1 169884983 169884997 EBF1 JASPAR yes 33017444
chr1 169884983 169884997 EBF1 JASPAR yes 118396481
chr1 169884984 169884995 EBF1 JASPAR yes 33017445
chr1 169884984 169884995 EBF1 JASPAR yes 118396482
chr1 169884985 169884996 EBF1 JASPAR yes 33017446
chr1 169884985 169884996 EBF1 JASPAR yes 118396483
chr1 169885011 169885015 NFE TRANSFAC yes 33017447
chr1 169885011 169885015 NFE TRANSFAC yes 118396484
chr1 169885016 169885033 RARA JASPAR yes 33017448
chr1 169885016 169885033 RARA JASPAR yes 118396485
chr1 169885037 169885049 POU2F1 JASPAR yes 33017449
chr1 169885037 169885049 POU2F1 JASPAR yes 118396486
chr1 169885039 169885048 POU3F4 JASPAR yes 33017450
chr1 169885039 169885048 POU5F1B JASPAR yes 33017451
chr1 169885039 169885048 POU3F4 JASPAR yes 118396487
chr1 169885039 169885048 POU5F1B JASPAR yes 118396488
chr1 169885039 169885055 SRF JASPAR yes 33017452
chr1 169885039 169885055 SRF JASPAR yes 118396489
chr1 169885048 169885069 IRF1 JASPAR yes 33017453
chr1 169885048 169885069 IRF1 JASPAR yes 118396490
chr1 169885051 169885065 IRF8 JASPAR yes 33017454
chr1 169885051 169885065 IRF8 JASPAR yes 118396491
chr1 169885070 169885076 TCF1 TRANSFAC yes 33017455
chr1 169885070 169885076 TCF1 TRANSFAC yes 118396492
chr1 169885071 169885091 TP53 JASPAR yes 33017456
chr1 169885071 169885091 TP53 JASPAR yes 118396493
chr1 169885082 169885094 TAL1 JASPAR yes 33017457
chr1 169885082 169885094 TAL1 JASPAR yes 118396494
chr1 169885083 169885095 BHLHE23 JASPAR yes 33017458
chr1 169885083 169885095 BHLHE23 JASPAR yes 118396495
chr1 169885084 169885094 BHLHE22 JASPAR yes 33017459
chr1 169885084 169885094 NEUROD2 JASPAR yes 33017460
chr1 169885084 169885094 NEUROG2 JASPAR yes 33017461
chr1 169885084 169885094 OLIG1 JASPAR yes 33017462
chr1 169885084 169885094 OLIG2 JASPAR yes 33017463
chr1 169885084 169885094 OLIG3 JASPAR yes 33017464
chr1 169885084 169885094 BHLHE22 JASPAR yes 118396496
chr1 169885084 169885094 NEUROD2 JASPAR yes 118396497
chr1 169885084 169885094 NEUROG2 JASPAR yes 118396498
chr1 169885084 169885094 OLIG1 JASPAR yes 118396499
chr1 169885084 169885094 OLIG2 JASPAR yes 118396500
chr1 169885084 169885094 OLIG3 JASPAR yes 118396501
chr1 169885084 169885096 TAL1 JASPAR yes 33017465
chr1 169885084 169885096 TAL1 JASPAR yes 118396502
chr1 169885100 169885110 SREBF2 JASPAR yes 33017466
chr1 169885100 169885110 SREBF2 JASPAR yes 118396503
chr1 169885100 169885111 USF2 JASPAR yes 33017467
chr1 169885100 169885111 USF2 JASPAR yes 118396504
chr1 169885109 169885123 SPI1 JASPAR yes 33017468
chr1 169885109 169885123 SPI1 JASPAR yes 118396505
chr1 169885118 169885130 E2F8 JASPAR yes 33017469
chr1 169885118 169885130 E2F8 JASPAR yes 118396506
chr1 169885142 169885160 NR3C1 JASPAR yes 33017470
chr1 169885142 169885160 NR3C1 JASPAR yes 118396507
chr1 169885157 169885173 POU4F3 JASPAR yes 33017471
chr1 169885157 169885173 POU4F3 JASPAR yes 118396508
chr1 169885159 169885173 POU4F1 JASPAR yes 33017472
chr1 169885159 169885173 POU4F1 JASPAR yes 118396509
chr1 169885160 169885174 POU4F1 JASPAR yes 33017473
chr1 169885160 169885174 POU4F1 JASPAR yes 118396510
chr1 169885170 169885174 YY1 TRANSFAC yes 33017474
chr1 169885170 169885174 YY1 TRANSFAC yes 118396511
chr1 169885190 169885196 SOX10 JASPAR yes 33017475
chr1 169885190 169885196 SOX10 JASPAR yes 118396512
chr1 169885209 169885226 BCL6B JASPAR yes 33017476
chr1 169885209 169885226 BCL6B JASPAR yes 118396513
SNP sites on vista3835[chr1:169884881-169885211]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 169884998 rs568770601 AT A
BHLHE40 EBF1 RUNX3 SPI1
718249
chr1 169885032 rs530896210 TACA T
BHLHE40 EBF1 RARA RUNX3 SPI1
718250
Genes possibly regulated by vista3835[chr1:169884881-169885211]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 169818772 169863408 - SCYL3 ENSG00000000457.9 169863408 0.63 1.0 1555 78527
Expression level of Genes
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miRNAs possibly regulated by vista3835[chr1:169884881-169885211]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results