EnhancerDB
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  3. vista3838[chr1:170042588-170042670]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3838[chr1:170042588-170042670]
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Tissue distribution of vista3838
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Transcription factor that possibly regulate vista3838[chr1:170042588-170042670]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 170042578 170042597 PAX5 JASPAR yes 33022092
chr1 170042578 170042597 PAX5 JASPAR yes 118396593
chr1 170042595 170042606 FOXC1 JASPAR yes 33022093
chr1 170042595 170042606 FOXC1 JASPAR yes 118396594
chr1 170042617 170042628 HOXD12 JASPAR yes 33022094
chr1 170042617 170042628 HOXD12 JASPAR yes 118396595
chr1 170042651 170042665 PAX6 JASPAR yes 33022095
chr1 170042651 170042665 PAX6 JASPAR yes 118396596
chr1 170042651 170042672 IRF1 JASPAR yes 33022096
chr1 170042651 170042672 IRF1 JASPAR yes 118396597
chr1 170042653 170042668 STAT2 JASPAR yes 33022097
chr1 170042653 170042668 STAT2 JASPAR yes 118396598
chr1 170042654 170042668 STAT1 JASPAR yes 33022098
chr1 170042654 170042668 STAT1 JASPAR yes 118396599
chr1 170042655 170042667 IRF1 JASPAR yes 33022099
chr1 170042655 170042667 IRF1 JASPAR yes 118396600
chr1 170042655 170042669 IRF7 JASPAR yes 33022100
chr1 170042655 170042669 IRF8 JASPAR yes 33022101
chr1 170042655 170042669 IRF7 JASPAR yes 118396601
chr1 170042655 170042669 IRF8 JASPAR yes 118396602
chr1 170042655 170042670 IRF9 JASPAR yes 33022102
chr1 170042655 170042670 IRF9 JASPAR yes 118396603
chr1 170042660 170042664 YY1 TRANSFAC yes 33022103
chr1 170042660 170042664 YY1 TRANSFAC yes 118396604
SNP sites on vista3838[chr1:170042588-170042670]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 170042595 rs111858352 G C
FOXC1 PAX5
718647
Genes possibly regulated by vista3838[chr1:170042588-170042670]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 169890467 170054349 - KIFAP3 ENSG00000075945.8 170054349 0.64 0.99 1556 88321
chr1 170115142 170136931 + METTL11B ENSG00000203740.3 170115142 0.99 0.95 1557 27528
Expression level of Genes
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miRNAs possibly regulated by vista3838[chr1:170042588-170042670]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results