EnhancerDB
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  3. vista3847[chr1:170636506-170636902]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3847[chr1:170636506-170636902]
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Tissue distribution of vista3847
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Transcription factor that possibly regulate vista3847[chr1:170636506-170636902]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 170636516 170636519 MYB TRANSFAC yes 118396942
chr1 170636533 170636544 HOXC13 JASPAR yes 118396943
chr1 170636537 170636541 TEAD2 TRANSFAC yes 118396944
chr1 170636548 170636569 ZNF263 JASPAR yes 118396945
chr1 170636583 170636589 MAZ TRANSFAC yes 118396946
chr1 170636619 170636632 NFKB1 JASPAR yes 118396947
chr1 170636654 170636673 RFX2 JASPAR yes 118396948
chr1 170636656 170636671 RFX5 JASPAR yes 118396949
chr1 170636659 170636668 NFIX JASPAR yes 118396950
chr1 170636659 170636669 NFIA JASPAR yes 118396951
chr1 170636661 170636667 NFIC JASPAR yes 118396952
chr1 170636667 170636677 MSC JASPAR yes 118396953
chr1 170636686 170636705 REST JASPAR yes 118396954
chr1 170636697 170636707 TFAP4 JASPAR yes 118396955
chr1 170636739 170636750 FOSL1 JASPAR yes 118396956
chr1 170636741 170636747 JUN TRANSFAC yes 118396957
chr1 170636742 170636763 ZNF263 JASPAR yes 118396958
chr1 170636748 170636753 ETS2 TRANSFAC yes 118396959
chr1 170636749 170636759 SP1 JASPAR yes 118396960
chr1 170636774 170636780 YY1 JASPAR yes 118396961
chr1 170636779 170636799 PPARG JASPAR yes 118396962
chr1 170636794 170636804 SP1 JASPAR yes 118396963
chr1 170636796 170636806 ZNF740 JASPAR yes 118396964
chr1 170636798 170636811 TFAP2B JASPAR yes 118396965
chr1 170636798 170636811 TFAP2C JASPAR yes 118396966
chr1 170636840 170636846 LEF1 TRANSFAC yes 118396967
chr1 170636840 170636846 SOX10 JASPAR yes 118396968
chr1 170636845 170636850 GATA2 JASPAR yes 118396969
chr1 170636863 170636872 NKX2-8 JASPAR yes 118396970
SNP sites on vista3847[chr1:170636506-170636902]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 170636509 rs572511488 T G no 720730
chr1 170636539 rs78211396 A G
HOXC13 TEAD2
720731
chr1 170636588 rs180834194 G A
MAZ
720732
chr1 170636630 rs111313019 G A,T
NFKB1
720733
chr1 170636705 rs116779339 G A
REST TFAP4
720734
chr1 170636761 rs559385273 G A
ZNF263
720735
chr1 170636803 rs144123882 C A,G
SP1 TFAP2B TFAP2C ZNF740
720736
Genes possibly regulated by vista3847[chr1:170636506-170636902]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 170631869 170708560 + PRRX1 ENSG00000116132.7 170631869 0.84 1.0 1559 95363
Expression level of Genes
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miRNAs possibly regulated by vista3847[chr1:170636506-170636902]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results