EnhancerDB
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  3. vista3850[chr1:170640579-170640941]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3850[chr1:170640579-170640941]
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Tissue distribution of vista3850
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Transcription factor that possibly regulate vista3850[chr1:170640579-170640941]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 170640459 170640902 CTCF UCSC Txn Factor no Conserved 107845201
chr1 170640529 170640793 RAD21 UCSC Txn Factor no Conserved 107845210
chr1 170640603 170640609 ETS1 JASPAR yes 33046842
chr1 170640603 170640609 ETS1 JASPAR yes 118397027
chr1 170640616 170640624 HOXA5 JASPAR yes 33046843
chr1 170640616 170640624 HOXA5 JASPAR yes 118397028
chr1 170640641 170640662 ZNF263 JASPAR yes 33046844
chr1 170640641 170640662 ZNF263 JASPAR yes 118397029
chr1 170640660 170640679 CTCF JASPAR yes 33046845
chr1 170640660 170640679 CTCF JASPAR yes 118397030
chr1 170640701 170640705 NFE TRANSFAC yes 33046846
chr1 170640701 170640705 NFE TRANSFAC yes 118397031
chr1 170640702 170640707 GATA2 JASPAR yes 33046847
chr1 170640702 170640707 GATA2 JASPAR yes 118397032
chr1 170640713 170640729 SOX4 JASPAR yes 33046848
chr1 170640713 170640729 SOX4 JASPAR yes 118397033
chr1 170640733 170640748 AR JASPAR yes 33046849
chr1 170640733 170640748 AR JASPAR yes 118397034
chr1 170640745 170640748 MYB TRANSFAC yes 33046850
chr1 170640745 170640748 MYB TRANSFAC yes 118397035
chr1 170640764 170640782 MAFF JASPAR yes 33046851
chr1 170640764 170640782 MAFF JASPAR yes 118397036
chr1 170640766 170640781 MAFK JASPAR yes 33046852
chr1 170640766 170640781 MAFK JASPAR yes 118397037
chr1 170640796 170640800 TEAD2 TRANSFAC yes 33046853
chr1 170640796 170640800 TEAD2 TRANSFAC yes 118397038
chr1 170640821 170640831 NFATC3 JASPAR yes 33046854
chr1 170640821 170640831 NFATC3 JASPAR yes 118397039
chr1 170640823 170640831 FOXO3 JASPAR yes 33046855
chr1 170640823 170640831 FOXO3 JASPAR yes 118397040
chr1 170640826 170640846 TP63 JASPAR yes 33046856
chr1 170640826 170640846 TP63 JASPAR yes 118397041
chr1 170640827 170640845 TP73 JASPAR yes 33046857
chr1 170640827 170640845 TP73 JASPAR yes 118397042
chr1 170640834 170640846 PKNOX1 JASPAR yes 33046858
chr1 170640834 170640846 PKNOX2 JASPAR yes 33046859
chr1 170640834 170640846 TGIF1 JASPAR yes 33046860
chr1 170640834 170640846 TGIF2 JASPAR yes 33046861
chr1 170640834 170640846 PKNOX1 JASPAR yes 118397043
chr1 170640834 170640846 PKNOX2 JASPAR yes 118397044
chr1 170640834 170640846 TGIF1 JASPAR yes 118397045
chr1 170640834 170640846 TGIF2 JASPAR yes 118397046
chr1 170640835 170640845 ID4 JASPAR yes 33046862
chr1 170640835 170640845 ID4 JASPAR yes 118397047
chr1 170640837 170640842 USF2 TRANSFAC yes 33046863
chr1 170640837 170640842 USF2 TRANSFAC yes 118397048
chr1 170640852 170640866 TLX1 JASPAR yes 33046864
chr1 170640852 170640866 TLX1 JASPAR yes 118397049
chr1 170640881 170640893 GLI2 JASPAR yes 33046865
chr1 170640881 170640893 ZBTB7B JASPAR yes 33046866
chr1 170640881 170640893 ZBTB7C JASPAR yes 33046867
chr1 170640881 170640893 GLI2 JASPAR yes 118397050
chr1 170640881 170640893 ZBTB7B JASPAR yes 118397051
chr1 170640881 170640893 ZBTB7C JASPAR yes 118397052
chr1 170640882 170640894 ZBTB7A JASPAR yes 33046868
chr1 170640882 170640894 ZBTB7A JASPAR yes 118397053
chr1 170640901 170640922 ZNF263 JASPAR yes 33046869
chr1 170640901 170640922 ZNF263 JASPAR yes 118397054
chr1 170640917 170640935 ESR2 JASPAR yes 33046870
chr1 170640917 170640935 ESR2 JASPAR yes 118397055
chr1 170640918 170640923 SP1 TRANSFAC yes 33046871
chr1 170640918 170640923 SP1 TRANSFAC yes 118397056
chr1 170640921 170640932 USF1 JASPAR yes 33046872
chr1 170640921 170640932 USF1 JASPAR yes 118397057
chr1 170640932 170640938 ZNF354C JASPAR yes 33046873
chr1 170640932 170640938 ZNF354C JASPAR yes 118397058
chr1 170640941 170640953 ZBTB7B JASPAR yes 33046874
chr1 170640941 170640953 ZBTB7C JASPAR yes 33046875
chr1 170640941 170640953 ZBTB7B JASPAR yes 118397059
chr1 170640941 170640953 ZBTB7C JASPAR yes 118397060
SNP sites on vista3850[chr1:170640579-170640941]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 170640624 rs73034968 G C,T
CTCF HOXA5 RAD21
720765
chr1 170640912 rs185065092 G A
ZNF263
720766
Genes possibly regulated by vista3850[chr1:170640579-170640941]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 170631869 170708560 + PRRX1 ENSG00000116132.7 170631869 0.84 1.0 1559 91290
Expression level of Genes
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miRNAs possibly regulated by vista3850[chr1:170640579-170640941]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results