EnhancerDB
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  3. vista3865[chr1:171360015-171360229]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3865[chr1:171360015-171360229]
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Tissue distribution of vista3865
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Transcription factor that possibly regulate vista3865[chr1:171360015-171360229]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 171360035 171360045 MSC JASPAR yes 118397771
chr1 171360044 171360062 SRF JASPAR yes 118397772
chr1 171360046 171360062 SRF JASPAR yes 118397773
chr1 171360046 171360064 SRF JASPAR yes 118397774
chr1 171360047 171360059 SRF JASPAR yes 118397775
chr1 171360049 171360061 SRF JASPAR yes 118397776
chr1 171360052 171360056 YY1 TRANSFAC yes 118397777
chr1 171360059 171360069 SP1 JASPAR yes 118397778
chr1 171360065 171360076 FLI1 JASPAR yes 118397779
chr1 171360066 171360077 SPDEF JASPAR yes 118397780
chr1 171360067 171360085 MAFF JASPAR yes 118397781
chr1 171360069 171360087 NFYA JASPAR yes 118397782
chr1 171360072 171360088 NFYA JASPAR yes 118397783
chr1 171360075 171360090 NFYB JASPAR yes 118397784
chr1 171360077 171360082 NFY TRANSFAC yes 118397785
chr1 171360081 171360085 H4TF2 TRANSFAC yes 118397786
chr1 171360085 171360089 YY1 TRANSFAC yes 118397787
chr1 171360091 171360109 MAFF JASPAR yes 118397788
chr1 171360093 171360108 MAFK JASPAR yes 118397789
chr1 171360093 171360111 NFYA JASPAR yes 118397790
chr1 171360096 171360112 NFYA JASPAR yes 118397791
chr1 171360099 171360114 NFYB JASPAR yes 118397792
chr1 171360101 171360106 NFY TRANSFAC yes 118397793
chr1 171360105 171360109 H4TF2 TRANSFAC yes 118397794
chr1 171360109 171360113 YY1 TRANSFAC yes 118397795
chr1 171360116 171360134 MAFF JASPAR yes 118397796
chr1 171360118 171360133 MAFK JASPAR yes 118397797
chr1 171360118 171360136 NFYA JASPAR yes 118397798
chr1 171360123 171360135 PBX1 JASPAR yes 118397799
chr1 171360159 171360174 MAFK JASPAR yes 118397800
chr1 171360159 171360177 NFYA JASPAR yes 118397801
chr1 171360162 171360178 NFYA JASPAR yes 118397802
chr1 171360165 171360180 NFYB JASPAR yes 118397803
chr1 171360167 171360172 NFY TRANSFAC yes 118397804
chr1 171360172 171360187 FOXP1 JASPAR yes 118397805
chr1 171360173 171360184 FOXP2 JASPAR yes 118397806
chr1 171360174 171360182 FOXD1 JASPAR yes 118397807
chr1 171360174 171360182 FOXG1 JASPAR yes 118397808
chr1 171360174 171360182 FOXO3 JASPAR yes 118397809
chr1 171360175 171360182 FOXD2 JASPAR yes 118397810
chr1 171360175 171360182 FOXI1 JASPAR yes 118397811
chr1 171360175 171360182 FOXL1 JASPAR yes 118397812
chr1 171360175 171360182 FOXO4 JASPAR yes 118397813
chr1 171360175 171360182 FOXO6 JASPAR yes 118397814
chr1 171360175 171360182 FOXP3 JASPAR yes 118397815
chr1 171360175 171360183 FOXO3 JASPAR yes 118397816
chr1 171360175 171360186 FOXA1 JASPAR yes 118397817
chr1 171360214 171360220 MZF1 JASPAR yes 118397818
chr1 171360215 171360224 ZEB1 JASPAR yes 118397819
chr1 171360216 171360227 USF1 JASPAR yes 118397820
chr1 171360218 171360223 USF2 TRANSFAC yes 118397821
SNP sites on vista3865[chr1:171360015-171360229]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 171360118 rs575757870 C T
MAFF MAFK NFYA
723747
chr1 171360176 rs61816104 T A
FOXA1 FOXD1 FOXD2 FOXG1 FOXI1 FOXL1 FOXO3 FOXO4 FOXO6 FOXP1 FOXP2 FOXP3 NFYA NFYB
723748
Genes possibly regulated by vista3865[chr1:171360015-171360229]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 171283347 171311223 + FMO4 ENSG00000076258.5 171283347 0.87 1.0 1565 23332
chr1 171454651 171562650 + PRRC2C ENSG00000117523.11 171454651 0.67 0.99 1566 5578
Expression level of Genes
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miRNAs possibly regulated by vista3865[chr1:171360015-171360229]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results