EnhancerDB
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  3. vista3869[chr1:171473011-171473311]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3869[chr1:171473011-171473311]
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Tissue distribution of vista3869
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Transcription factor that possibly regulate vista3869[chr1:171473011-171473311]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 171473026 171473037 NFKB1 JASPAR yes 33085546
chr1 171473026 171473037 NFKB1 JASPAR yes 118397922
chr1 171473027 171473038 NFKB1 JASPAR yes 33085547
chr1 171473027 171473038 NFKB1 JASPAR yes 118397923
chr1 171473030 171473044 SPI1 JASPAR yes 33085548
chr1 171473030 171473044 SPIC JASPAR yes 33085549
chr1 171473030 171473044 SPI1 JASPAR yes 118397924
chr1 171473030 171473044 SPIC JASPAR yes 118397925
chr1 171473040 171473044 TEAD2 TRANSFAC yes 118397926
chr1 171473040 171473045 TBP TRANSFAC yes 118397927
chr1 171473040 171473046 TFIID TRANSFAC yes 118397928
chr1 171473073 171473077 NFE TRANSFAC yes 118397929
chr1 171473092 171473102 REL JASPAR yes 118397930
chr1 171473103 171473109 MZF1 JASPAR yes 118397931
chr1 171473107 171473118 FOS JASPAR yes 118397932
chr1 171473108 171473121 DUXA JASPAR yes 118397933
chr1 171473109 171473120 DUX4 JASPAR yes 118397934
chr1 171473118 171473130 TEAD1 JASPAR yes 118397935
chr1 171473141 171473153 PKNOX2 JASPAR yes 118397936
chr1 171473173 171473184 DUX4 JASPAR yes 118397937
chr1 171473187 171473192 TFAP2A TRANSFAC yes 118397938
chr1 171473187 171473193 MZF1 JASPAR yes 118397939
chr1 171473215 171473220 GATA1 TRANSFAC yes 33085550
chr1 171473215 171473220 GATA1 TRANSFAC yes 118397940
chr1 171473229 171473236 NKX3-1 JASPAR yes 33085551
chr1 171473229 171473236 NKX3-1 JASPAR yes 118397941
chr1 171473230 171473238 FOXC1 JASPAR yes 33085552
chr1 171473230 171473238 FOXC1 JASPAR yes 118397942
chr1 171473230 171473244 SPIC JASPAR yes 33085553
chr1 171473230 171473244 SPIC JASPAR yes 118397943
chr1 171473235 171473248 POU2F2 JASPAR yes 33085554
chr1 171473235 171473248 POU2F2 JASPAR yes 118397944
chr1 171473237 171473241 YY1 TRANSFAC yes 33085555
chr1 171473237 171473241 YY1 TRANSFAC yes 118397945
SNP sites on vista3869[chr1:171473011-171473311]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 171473015 rs370076799 A G no 724732
chr1 171473129 rs148128659 C T
TEAD1
724733
chr1 171473163 rs529498722 G T no 724734
Genes possibly regulated by vista3869[chr1:171473011-171473311]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 171454651 171562650 + PRRC2C ENSG00000117523.11 171454651 0.67 0.99 1566 81640
Expression level of Genes
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miRNAs possibly regulated by vista3869[chr1:171473011-171473311]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results