EnhancerDB
  1. Home
  2. Enhancers
  3. vista3874[chr1:171948446-171948693]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3874[chr1:171948446-171948693]
Back to top
Tissue distribution of vista3874
Back to top
Transcription factor that possibly regulate vista3874[chr1:171948446-171948693]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 171948446 171948450 TEAD2 TRANSFAC yes 118398145
chr1 171948446 171948451 TBP TRANSFAC yes 118398146
chr1 171948446 171948452 TFIID TRANSFAC yes 118398147
chr1 171948448 171948454 TBP TRANSFAC yes 118398148
chr1 171948492 171948503 FLI1 JASPAR yes 118398149
chr1 171948493 171948498 ETS2 TRANSFAC yes 118398150
chr1 171948493 171948501 FEV JASPAR yes 118398151
chr1 171948507 171948512 MYB TRANSFAC yes 118398152
chr1 171948524 171948536 YY1 JASPAR yes 118398153
chr1 171948571 171948585 GATA2 JASPAR yes 118398154
chr1 171948575 171948583 GATA3 JASPAR yes 118398155
chr1 171948617 171948621 TEAD2 TRANSFAC yes 118398156
chr1 171948617 171948622 TBP TRANSFAC yes 118398157
chr1 171948617 171948623 TFIID TRANSFAC yes 118398158
chr1 171948634 171948640 TCF4 TRANSFAC yes 118398159
chr1 171948657 171948667 NFATC3 JASPAR yes 118398160
chr1 171948659 171948666 NFATC2 JASPAR yes 118398161
SNP sites on vista3874[chr1:171948446-171948693]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 171948474 rs12083356 A C no 726493
chr1 171948547 rs367590053 G A no 726494
Genes possibly regulated by vista3874[chr1:171948446-171948693]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
Back to top
No results
miRNAs possibly regulated by vista3874[chr1:171948446-171948693]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 172107956 172107977 - hsa-miR-214-3p MIMAT0000271 172113933 0.018433094579697114 0.722743 0.0 96
Expression level of miRNAs
Back to top